Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm20708H3BKF4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Gm38205-201ENSMUST00000192243 258 ntBASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm20708H3BKF4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.08■□□□□ 0.17
Gm20708H3BKF4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm20708H3BKF4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.07■□□□□ 0.16
Gm20708H3BKF4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm20708H3BKF4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.07■□□□□ 0.16
Gm20708H3BKF4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.07■□□□□ 0.16
Gm20708H3BKF4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm20708H3BKF4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm20708H3BKF4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Reep4-203ENSMUST00000226563 1444 ntBASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm20708H3BKF4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Gm9988-201ENSMUST00000069786 435 ntBASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm20708H3BKF4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm20708H3BKF4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm20708H3BKF4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm20708H3BKF4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm20708H3BKF4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm20708H3BKF4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm20708H3BKF4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms