Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm37035-201ENSMUST00000194809 2148 ntBASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Gm2559-201ENSMUST00000201323 363 ntBASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC26.85■■□□□ 1.89
Zc3h13E9Q784 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Zc3h13E9Q784 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Zc3h13E9Q784 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Zc3h13E9Q784 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Zc3h13E9Q784 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Zc3h13E9Q784 Mir5122-201ENSMUST00000175004 89 ntBASIC26.83■■□□□ 1.89
Zc3h13E9Q784 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC26.83■■□□□ 1.89
Zc3h13E9Q784 Gm10459-201ENSMUST00000202708 1155 ntBASIC26.83■■□□□ 1.89
Zc3h13E9Q784 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC26.83■■□□□ 1.89
Zc3h13E9Q784 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC26.83■■□□□ 1.89
Zc3h13E9Q784 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC26.83■■□□□ 1.88
Zc3h13E9Q784 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC26.82■■□□□ 1.88
Zc3h13E9Q784 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Gm20472-201ENSMUST00000174403 1240 ntBASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Gm27741-201ENSMUST00000185060 237 ntBASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Zc3h13E9Q784 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h13E9Q784 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h13E9Q784 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h13E9Q784 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h13E9Q784 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h13E9Q784 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Zc3h13E9Q784 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Zc3h13E9Q784 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Zc3h13E9Q784 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Zc3h13E9Q784 Gm43799-201ENSMUST00000201845 579 ntBASIC26.78■■□□□ 1.88
Zc3h13E9Q784 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC26.78■■□□□ 1.88
Zc3h13E9Q784 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Zc3h13E9Q784 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC26.77■■□□□ 1.88
Zc3h13E9Q784 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Zc3h13E9Q784 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Zc3h13E9Q784 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Zc3h13E9Q784 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Zc3h13E9Q784 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
Zc3h13E9Q784 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC26.76■■□□□ 1.88
Zc3h13E9Q784 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Zc3h13E9Q784 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Zc3h13E9Q784 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC26.76■■□□□ 1.87
Zc3h13E9Q784 Gm18666-201ENSMUST00000190039 958 ntBASIC26.76■■□□□ 1.87
Zc3h13E9Q784 Gm21362-201ENSMUST00000194272 928 ntBASIC26.76■■□□□ 1.87
Zc3h13E9Q784 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Zc3h13E9Q784 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Zc3h13E9Q784 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Zc3h13E9Q784 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC26.74■■□□□ 1.87
Zc3h13E9Q784 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Zc3h13E9Q784 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Zc3h13E9Q784 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Zc3h13E9Q784 AC152827.1-201ENSMUST00000221143 2189 ntBASIC26.74■■□□□ 1.87
Zc3h13E9Q784 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Gm11249-201ENSMUST00000117071 859 ntBASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Gm6433-201ENSMUST00000118634 875 ntBASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Zc3h13E9Q784 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC26.72■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms