Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Igkv1-88A0A140T8N1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv1-88A0A140T8N1 Golph3-205ENSMUST00000228671 2842 ntBASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv1-88A0A140T8N1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Gm15820-201ENSMUST00000201566 728 ntBASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv1-88A0A140T8N1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv1-88A0A140T8N1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Etf1-202ENSMUST00000180351 108 ntBASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm43530-201ENSMUST00000195920 274 ntBASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms