Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc194A0A140LIT1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Serp2-204ENSMUST00000228055 705 ntBASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc194A0A140LIT1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc194A0A140LIT1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc194A0A140LIT1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc194A0A140LIT1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.98■□□□□ 0.63
Ccdc194A0A140LIT1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc194A0A140LIT1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc194A0A140LIT1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc194A0A140LIT1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc194A0A140LIT1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc194A0A140LIT1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc194A0A140LIT1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Gm43137-201ENSMUST00000198052 594 ntBASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ccdc194A0A140LIT1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms