Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-5A0A075B6B9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-5A0A075B6B9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.46■□□□□ 0.06
Trav6d-5A0A075B6B9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6d-5A0A075B6B9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6d-5A0A075B6B9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-5A0A075B6B9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.44■□□□□ 0.06
Trav6d-5A0A075B6B9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm5921-201ENSMUST00000075898 882 ntBASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-5A0A075B6B9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms