Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav12d-3A0A075B6A4 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12d-3A0A075B6A4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.28□□□□□ -0.12
Trav12d-3A0A075B6A4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav12d-3A0A075B6A4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12d-3A0A075B6A4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12d-3A0A075B6A4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm11599-201ENSMUST00000118720 878 ntBASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12d-3A0A075B6A4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms