Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav3-4A0A075B654 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav3-4A0A075B654 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav3-4A0A075B654 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.9□□□□□ -0.35
Trav3-4A0A075B654 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-4A0A075B654 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav3-4A0A075B654 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav3-4A0A075B654 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav3-4A0A075B654 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav3-4A0A075B654 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms