Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.04■■□□□ 1.6
Tdp2Q9JJX7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tdp2Q9JJX7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tdp2Q9JJX7 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.02■■□□□ 1.6
Tdp2Q9JJX7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Tdp2Q9JJX7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tdp2Q9JJX7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Tdp2Q9JJX7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25■■□□□ 1.59
Tdp2Q9JJX7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tdp2Q9JJX7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Tdp2Q9JJX7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Tdp2Q9JJX7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Tdp2Q9JJX7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Tdp2Q9JJX7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tdp2Q9JJX7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
Tdp2Q9JJX7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.97■■□□□ 1.59
Tdp2Q9JJX7 Amer2-203ENSMUST00000225247 2662 ntBASIC24.97■■□□□ 1.59
Tdp2Q9JJX7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Tdp2Q9JJX7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Tdp2Q9JJX7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tdp2Q9JJX7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Tdp2Q9JJX7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tdp2Q9JJX7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Tdp2Q9JJX7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Tdp2Q9JJX7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tdp2Q9JJX7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tdp2Q9JJX7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Tdp2Q9JJX7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.89■■□□□ 1.58
Tdp2Q9JJX7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Tdp2Q9JJX7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Tdp2Q9JJX7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tdp2Q9JJX7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Tdp2Q9JJX7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tdp2Q9JJX7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tdp2Q9JJX7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Tdp2Q9JJX7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tdp2Q9JJX7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Tdp2Q9JJX7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
Tdp2Q9JJX7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Tdp2Q9JJX7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.83■■□□□ 1.57
Tdp2Q9JJX7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.83■■□□□ 1.57
Tdp2Q9JJX7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tdp2Q9JJX7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
Tdp2Q9JJX7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
Tdp2Q9JJX7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Tdp2Q9JJX7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tdp2Q9JJX7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Tdp2Q9JJX7 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.79■■□□□ 1.56
Tdp2Q9JJX7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Tdp2Q9JJX7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Tdp2Q9JJX7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.77■■□□□ 1.56
Tdp2Q9JJX7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Tdp2Q9JJX7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.75■■□□□ 1.55
Tdp2Q9JJX7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tdp2Q9JJX7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tdp2Q9JJX7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tdp2Q9JJX7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Tdp2Q9JJX7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Tdp2Q9JJX7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.71■■□□□ 1.55
Tdp2Q9JJX7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Tdp2Q9JJX7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Tdp2Q9JJX7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tdp2Q9JJX7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Tdp2Q9JJX7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.7■■□□□ 1.54
Tdp2Q9JJX7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tdp2Q9JJX7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.69■■□□□ 1.54
Tdp2Q9JJX7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tdp2Q9JJX7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Tdp2Q9JJX7 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.69■■□□□ 1.54
Tdp2Q9JJX7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Tdp2Q9JJX7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tdp2Q9JJX7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tdp2Q9JJX7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Tdp2Q9JJX7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Tdp2Q9JJX7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Tdp2Q9JJX7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Tdp2Q9JJX7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Tdp2Q9JJX7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.64■■□□□ 1.53
Tdp2Q9JJX7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tdp2Q9JJX7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Tdp2Q9JJX7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Tdp2Q9JJX7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tdp2Q9JJX7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Tdp2Q9JJX7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Tdp2Q9JJX7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tdp2Q9JJX7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tdp2Q9JJX7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Tdp2Q9JJX7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Tdp2Q9JJX7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.58■■□□□ 1.52
Tdp2Q9JJX7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tdp2Q9JJX7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tdp2Q9JJX7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Tdp2Q9JJX7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Tdp2Q9JJX7 Zfp131-205ENSMUST00000223812 663 ntBASIC24.55■■□□□ 1.52
Tdp2Q9JJX7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp2Q9JJX7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp2Q9JJX7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.53■■□□□ 1.52
Tdp2Q9JJX7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Tdp2Q9JJX7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Tdp2Q9JJX7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms