Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4bQ9ES00 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Ube4bQ9ES00 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ube4bQ9ES00 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.06■■□□□ 1.44
Ube4bQ9ES00 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ube4bQ9ES00 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ube4bQ9ES00 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ube4bQ9ES00 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.04■■□□□ 1.44
Ube4bQ9ES00 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ube4bQ9ES00 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ube4bQ9ES00 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ube4bQ9ES00 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.01■■□□□ 1.43
Ube4bQ9ES00 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ube4bQ9ES00 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24■■□□□ 1.43
Ube4bQ9ES00 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ube4bQ9ES00 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ube4bQ9ES00 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Ube4bQ9ES00 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ube4bQ9ES00 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ube4bQ9ES00 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ube4bQ9ES00 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ube4bQ9ES00 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ube4bQ9ES00 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ube4bQ9ES00 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ube4bQ9ES00 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ube4bQ9ES00 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ube4bQ9ES00 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Ube4bQ9ES00 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ube4bQ9ES00 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.89■■□□□ 1.41
Ube4bQ9ES00 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ube4bQ9ES00 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4bQ9ES00 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4bQ9ES00 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ube4bQ9ES00 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ube4bQ9ES00 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ube4bQ9ES00 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.86■■□□□ 1.41
Ube4bQ9ES00 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ube4bQ9ES00 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ube4bQ9ES00 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ube4bQ9ES00 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ube4bQ9ES00 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ube4bQ9ES00 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Ube4bQ9ES00 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Ube4bQ9ES00 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ube4bQ9ES00 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4bQ9ES00 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4bQ9ES00 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4bQ9ES00 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.79■■□□□ 1.4
Ube4bQ9ES00 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4bQ9ES00 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Ube4bQ9ES00 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.77■■□□□ 1.4
Ube4bQ9ES00 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4bQ9ES00 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4bQ9ES00 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4bQ9ES00 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4bQ9ES00 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube4bQ9ES00 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.75■■□□□ 1.39
Ube4bQ9ES00 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube4bQ9ES00 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4bQ9ES00 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube4bQ9ES00 Gm25262-201ENSMUST00000174934 133 ntBASIC23.71■■□□□ 1.39
Ube4bQ9ES00 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ube4bQ9ES00 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ube4bQ9ES00 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ube4bQ9ES00 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ube4bQ9ES00 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ube4bQ9ES00 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ube4bQ9ES00 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ube4bQ9ES00 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ube4bQ9ES00 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ube4bQ9ES00 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ube4bQ9ES00 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.64■■□□□ 1.38
Ube4bQ9ES00 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ube4bQ9ES00 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ube4bQ9ES00 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ube4bQ9ES00 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ube4bQ9ES00 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Ube4bQ9ES00 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ube4bQ9ES00 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ube4bQ9ES00 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ube4bQ9ES00 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ube4bQ9ES00 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.57■■□□□ 1.36
Ube4bQ9ES00 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ube4bQ9ES00 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ube4bQ9ES00 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.56■■□□□ 1.36
Ube4bQ9ES00 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.56■■□□□ 1.36
Ube4bQ9ES00 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ube4bQ9ES00 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ube4bQ9ES00 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ube4bQ9ES00 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ube4bQ9ES00 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ube4bQ9ES00 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ube4bQ9ES00 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Ube4bQ9ES00 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.49■■□□□ 1.35
Ube4bQ9ES00 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Ube4bQ9ES00 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ube4bQ9ES00 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ube4bQ9ES00 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ube4bQ9ES00 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.48■■□□□ 1.35
Ube4bQ9ES00 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms