Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cir1Q9DA19 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cir1Q9DA19 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cir1Q9DA19 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cir1Q9DA19 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cir1Q9DA19 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cir1Q9DA19 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cir1Q9DA19 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cir1Q9DA19 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cir1Q9DA19 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cir1Q9DA19 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cir1Q9DA19 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cir1Q9DA19 Amer2-203ENSMUST00000225247 2662 ntBASIC21.44■■□□□ 1.02
Cir1Q9DA19 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cir1Q9DA19 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cir1Q9DA19 Zfp131-205ENSMUST00000223812 663 ntBASIC21.44■■□□□ 1.02
Cir1Q9DA19 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cir1Q9DA19 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cir1Q9DA19 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cir1Q9DA19 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cir1Q9DA19 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cir1Q9DA19 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cir1Q9DA19 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cir1Q9DA19 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cir1Q9DA19 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cir1Q9DA19 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cir1Q9DA19 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cir1Q9DA19 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Cir1Q9DA19 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cir1Q9DA19 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.37■■□□□ 1.01
Cir1Q9DA19 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cir1Q9DA19 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.36■■□□□ 1.01
Cir1Q9DA19 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cir1Q9DA19 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cir1Q9DA19 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cir1Q9DA19 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cir1Q9DA19 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cir1Q9DA19 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cir1Q9DA19 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.33■■□□□ 1
Cir1Q9DA19 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cir1Q9DA19 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cir1Q9DA19 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.31■■□□□ 1
Cir1Q9DA19 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cir1Q9DA19 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cir1Q9DA19 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cir1Q9DA19 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cir1Q9DA19 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cir1Q9DA19 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cir1Q9DA19 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Cir1Q9DA19 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cir1Q9DA19 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cir1Q9DA19 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.26■□□□□ 0.99
Cir1Q9DA19 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cir1Q9DA19 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cir1Q9DA19 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cir1Q9DA19 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cir1Q9DA19 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Cir1Q9DA19 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cir1Q9DA19 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cir1Q9DA19 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cir1Q9DA19 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cir1Q9DA19 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cir1Q9DA19 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cir1Q9DA19 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cir1Q9DA19 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cir1Q9DA19 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cir1Q9DA19 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.18■□□□□ 0.98
Cir1Q9DA19 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cir1Q9DA19 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cir1Q9DA19 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.17■□□□□ 0.98
Cir1Q9DA19 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cir1Q9DA19 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.17■□□□□ 0.98
Cir1Q9DA19 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cir1Q9DA19 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cir1Q9DA19 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cir1Q9DA19 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.15■□□□□ 0.98
Cir1Q9DA19 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.14■□□□□ 0.97
Cir1Q9DA19 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cir1Q9DA19 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cir1Q9DA19 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cir1Q9DA19 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cir1Q9DA19 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cir1Q9DA19 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cir1Q9DA19 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cir1Q9DA19 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cir1Q9DA19 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cir1Q9DA19 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cir1Q9DA19 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cir1Q9DA19 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cir1Q9DA19 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cir1Q9DA19 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cir1Q9DA19 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cir1Q9DA19 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cir1Q9DA19 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms