Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26,75■■□□□ 1,87
Llcfc1Q9D9P8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26,75■■□□□ 1,87
Llcfc1Q9D9P8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26,75■■□□□ 1,87
Llcfc1Q9D9P8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26,74■■□□□ 1,87
Llcfc1Q9D9P8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Llcfc1Q9D9P8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
Llcfc1Q9D9P8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26,73■■□□□ 1,87
Llcfc1Q9D9P8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26,72■■□□□ 1,87
Llcfc1Q9D9P8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Llcfc1Q9D9P8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26,7■■□□□ 1,86
Llcfc1Q9D9P8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Llcfc1Q9D9P8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26,69■■□□□ 1,86
Llcfc1Q9D9P8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26,68■■□□□ 1,86
Llcfc1Q9D9P8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26,68■■□□□ 1,86
Llcfc1Q9D9P8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26,67■■□□□ 1,86
Llcfc1Q9D9P8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26,67■■□□□ 1,86
Llcfc1Q9D9P8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26,66■■□□□ 1,86
Llcfc1Q9D9P8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26,66■■□□□ 1,86
Llcfc1Q9D9P8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Llcfc1Q9D9P8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26,65■■□□□ 1,86
Llcfc1Q9D9P8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26,65■■□□□ 1,86
Llcfc1Q9D9P8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26,64■■□□□ 1,86
Llcfc1Q9D9P8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26,63■■□□□ 1,85
Llcfc1Q9D9P8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Llcfc1Q9D9P8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26,61■■□□□ 1,85
Llcfc1Q9D9P8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26,61■■□□□ 1,85
Llcfc1Q9D9P8 Gm30346-201ENSMUST00000218641 1699 ntBASIC26,6■■□□□ 1,85
Llcfc1Q9D9P8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Llcfc1Q9D9P8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26,59■■□□□ 1,85
Llcfc1Q9D9P8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26,59■■□□□ 1,85
Llcfc1Q9D9P8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26,58■■□□□ 1,85
Llcfc1Q9D9P8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26,58■■□□□ 1,85
Llcfc1Q9D9P8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Llcfc1Q9D9P8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26,58■■□□□ 1,85
Llcfc1Q9D9P8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Llcfc1Q9D9P8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Llcfc1Q9D9P8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26,54■■□□□ 1,84
Llcfc1Q9D9P8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Llcfc1Q9D9P8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26,52■■□□□ 1,84
Llcfc1Q9D9P8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26,51■■□□□ 1,83
Llcfc1Q9D9P8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26,5■■□□□ 1,83
Llcfc1Q9D9P8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Llcfc1Q9D9P8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Llcfc1Q9D9P8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Llcfc1Q9D9P8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26,49■■□□□ 1,83
Llcfc1Q9D9P8 Peli2-204ENSMUST00000226513 1320 ntBASIC26,48■■□□□ 1,83
Llcfc1Q9D9P8 Amer2-203ENSMUST00000225247 2662 ntBASIC26,47■■□□□ 1,83
Llcfc1Q9D9P8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,47■■□□□ 1,83
Llcfc1Q9D9P8 Gm26115-201ENSMUST00000175605 87 ntBASIC26,45■■□□□ 1,82
Llcfc1Q9D9P8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Llcfc1Q9D9P8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26,44■■□□□ 1,82
Llcfc1Q9D9P8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Llcfc1Q9D9P8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26,42■■□□□ 1,82
Llcfc1Q9D9P8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Llcfc1Q9D9P8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Llcfc1Q9D9P8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26,41■■□□□ 1,82
Llcfc1Q9D9P8 Gm8109-201ENSMUST00000194076 746 ntBASIC26,41■■□□□ 1,82
Llcfc1Q9D9P8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Llcfc1Q9D9P8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Llcfc1Q9D9P8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26,4■■□□□ 1,82
Llcfc1Q9D9P8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26,4■■□□□ 1,82
Llcfc1Q9D9P8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Llcfc1Q9D9P8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26,39■■□□□ 1,82
Llcfc1Q9D9P8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Llcfc1Q9D9P8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Llcfc1Q9D9P8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Llcfc1Q9D9P8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26,37■■□□□ 1,81
Llcfc1Q9D9P8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26,37■■□□□ 1,81
Llcfc1Q9D9P8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Llcfc1Q9D9P8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26,36■■□□□ 1,81
Llcfc1Q9D9P8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Llcfc1Q9D9P8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
Llcfc1Q9D9P8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Llcfc1Q9D9P8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Llcfc1Q9D9P8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26,35■■□□□ 1,81
Llcfc1Q9D9P8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26,35■■□□□ 1,81
Llcfc1Q9D9P8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26,33■■□□□ 1,81
Llcfc1Q9D9P8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Llcfc1Q9D9P8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Llcfc1Q9D9P8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Llcfc1Q9D9P8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26,31■■□□□ 1,8
Llcfc1Q9D9P8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26,31■■□□□ 1,8
Llcfc1Q9D9P8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Llcfc1Q9D9P8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26,3■■□□□ 1,8
Llcfc1Q9D9P8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26,3■■□□□ 1,8
Llcfc1Q9D9P8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Llcfc1Q9D9P8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Llcfc1Q9D9P8 Fezf2-202ENSMUST00000224023 1917 ntBASIC26,28■■□□□ 1,8
Llcfc1Q9D9P8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26,28■■□□□ 1,8
Llcfc1Q9D9P8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26,27■■□□□ 1,8
Llcfc1Q9D9P8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Llcfc1Q9D9P8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26,26■■□□□ 1,79
Llcfc1Q9D9P8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
Llcfc1Q9D9P8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26,23■■□□□ 1,79
Llcfc1Q9D9P8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26,22■■□□□ 1,79
Llcfc1Q9D9P8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26,22■■□□□ 1,79
Llcfc1Q9D9P8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,79
Llcfc1Q9D9P8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26,19■■□□□ 1,78
Llcfc1Q9D9P8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
Llcfc1Q9D9P8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26,19■■□□□ 1,78
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms