Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm5987-201ENSMUST00000196433 1151 ntBASIC29,95■■■□□ 2,39
Rfc4Q99J62 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29,94■■■□□ 2,38
Rfc4Q99J62 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29,93■■■□□ 2,38
Rfc4Q99J62 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Rfc4Q99J62 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29,92■■■□□ 2,38
Rfc4Q99J62 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
Rfc4Q99J62 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29,9■■■□□ 2,38
Rfc4Q99J62 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Rfc4Q99J62 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Rfc4Q99J62 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29,86■■■□□ 2,37
Rfc4Q99J62 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29,86■■■□□ 2,37
Rfc4Q99J62 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29,85■■■□□ 2,37
Rfc4Q99J62 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
Rfc4Q99J62 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
Rfc4Q99J62 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,83■■■□□ 2,37
Rfc4Q99J62 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29,81■■■□□ 2,36
Rfc4Q99J62 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29,79■■■□□ 2,36
Rfc4Q99J62 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29,77■■■□□ 2,36
Rfc4Q99J62 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29,74■■■□□ 2,35
Rfc4Q99J62 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29,74■■■□□ 2,35
Rfc4Q99J62 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29,74■■■□□ 2,35
Rfc4Q99J62 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Rfc4Q99J62 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Rfc4Q99J62 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Rfc4Q99J62 Gm8503-201ENSMUST00000118131 455 ntBASIC29,71■■■□□ 2,35
Rfc4Q99J62 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29,71■■■□□ 2,35
Rfc4Q99J62 Gm43863-201ENSMUST00000203822 1192 ntBASIC29,7■■■□□ 2,35
Rfc4Q99J62 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29,69■■■□□ 2,34
Rfc4Q99J62 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Rfc4Q99J62 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29,67■■■□□ 2,34
Rfc4Q99J62 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Rfc4Q99J62 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Rfc4Q99J62 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Rfc4Q99J62 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29,64■■■□□ 2,34
Rfc4Q99J62 Gm6821-201ENSMUST00000107540 542 ntBASIC29,62■■■□□ 2,33
Rfc4Q99J62 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Rfc4Q99J62 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Rfc4Q99J62 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29,6■■■□□ 2,33
Rfc4Q99J62 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Rfc4Q99J62 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29,6■■■□□ 2,33
Rfc4Q99J62 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Rfc4Q99J62 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29,59■■■□□ 2,33
Rfc4Q99J62 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29,58■■■□□ 2,33
Rfc4Q99J62 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Rfc4Q99J62 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29,56■■■□□ 2,32
Rfc4Q99J62 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29,56■■■□□ 2,32
Rfc4Q99J62 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29,56■■■□□ 2,32
Rfc4Q99J62 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29,55■■■□□ 2,32
Rfc4Q99J62 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29,55■■■□□ 2,32
Rfc4Q99J62 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29,53■■■□□ 2,32
Rfc4Q99J62 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Rfc4Q99J62 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Rfc4Q99J62 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29,51■■■□□ 2,31
Rfc4Q99J62 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Rfc4Q99J62 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29,49■■■□□ 2,31
Rfc4Q99J62 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Rfc4Q99J62 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29,48■■■□□ 2,31
Rfc4Q99J62 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29,47■■■□□ 2,31
Rfc4Q99J62 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29,46■■■□□ 2,31
Rfc4Q99J62 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Rfc4Q99J62 AC157572.2-201ENSMUST00000226970 908 ntBASIC29,46■■■□□ 2,31
Rfc4Q99J62 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29,44■■■□□ 2,3
Rfc4Q99J62 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
Rfc4Q99J62 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Rfc4Q99J62 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29,41■■■□□ 2,3
Rfc4Q99J62 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Rfc4Q99J62 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29,4■■■□□ 2,3
Rfc4Q99J62 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Rfc4Q99J62 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29,38■■■□□ 2,29
Rfc4Q99J62 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29,37■■■□□ 2,29
Rfc4Q99J62 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29,37■■■□□ 2,29
Rfc4Q99J62 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29,36■■■□□ 2,29
Rfc4Q99J62 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29,36■■■□□ 2,29
Rfc4Q99J62 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Rfc4Q99J62 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29,35■■■□□ 2,29
Rfc4Q99J62 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Rfc4Q99J62 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Rfc4Q99J62 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29,32■■■□□ 2,28
Rfc4Q99J62 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29,31■■■□□ 2,28
Rfc4Q99J62 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29,3■■■□□ 2,28
Rfc4Q99J62 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29,29■■■□□ 2,28
Rfc4Q99J62 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29,27■■■□□ 2,28
Rfc4Q99J62 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29,27■■■□□ 2,28
Rfc4Q99J62 Gm42809-201ENSMUST00000198429 1138 ntBASIC29,27■■■□□ 2,28
Rfc4Q99J62 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29,27■■■□□ 2,28
Rfc4Q99J62 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,28
Rfc4Q99J62 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29,26■■■□□ 2,27
Rfc4Q99J62 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Rfc4Q99J62 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29,25■■■□□ 2,27
Rfc4Q99J62 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29,24■■■□□ 2,27
Rfc4Q99J62 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29,24■■■□□ 2,27
Rfc4Q99J62 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29,23■■■□□ 2,27
Rfc4Q99J62 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29,23■■■□□ 2,27
Rfc4Q99J62 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Rfc4Q99J62 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Rfc4Q99J62 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
Rfc4Q99J62 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29,2■■■□□ 2,27
Rfc4Q99J62 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29,2■■■□□ 2,27
Rfc4Q99J62 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29,2■■■□□ 2,26
Rfc4Q99J62 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29,2■■■□□ 2,26
Retrieved 100 of 76,532 protein–RNA pairs in 30,7 ms