Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
Trex1Q91XB0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Trex1Q91XB0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trex1Q91XB0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Trex1Q91XB0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.9■■■□□ 2.38
Trex1Q91XB0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Trex1Q91XB0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.9■■■□□ 2.38
Trex1Q91XB0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Trex1Q91XB0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Trex1Q91XB0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.88■■■□□ 2.37
Trex1Q91XB0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trex1Q91XB0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trex1Q91XB0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Trex1Q91XB0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Trex1Q91XB0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.86■■■□□ 2.37
Trex1Q91XB0 Gm24970-201ENSMUST00000175582 82 ntBASIC29.86■■■□□ 2.37
Trex1Q91XB0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trex1Q91XB0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trex1Q91XB0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Trex1Q91XB0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
Trex1Q91XB0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Trex1Q91XB0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Trex1Q91XB0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Trex1Q91XB0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trex1Q91XB0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Trex1Q91XB0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trex1Q91XB0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Trex1Q91XB0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Trex1Q91XB0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Trex1Q91XB0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.73■■■□□ 2.35
Trex1Q91XB0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.73■■■□□ 2.35
Trex1Q91XB0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Trex1Q91XB0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Trex1Q91XB0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.71■■■□□ 2.35
Trex1Q91XB0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Trex1Q91XB0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Trex1Q91XB0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
Trex1Q91XB0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Trex1Q91XB0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Trex1Q91XB0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.67■■■□□ 2.34
Trex1Q91XB0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Trex1Q91XB0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Trex1Q91XB0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Trex1Q91XB0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Trex1Q91XB0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
Trex1Q91XB0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
Trex1Q91XB0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Trex1Q91XB0 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.61■■■□□ 2.33
Trex1Q91XB0 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.6■■■□□ 2.33
Trex1Q91XB0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Trex1Q91XB0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Trex1Q91XB0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.58■■■□□ 2.33
Trex1Q91XB0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Trex1Q91XB0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Trex1Q91XB0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Trex1Q91XB0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Trex1Q91XB0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Trex1Q91XB0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
Trex1Q91XB0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Trex1Q91XB0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Trex1Q91XB0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Trex1Q91XB0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Trex1Q91XB0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Trex1Q91XB0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.46■■■□□ 2.31
Trex1Q91XB0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
Trex1Q91XB0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
Trex1Q91XB0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Trex1Q91XB0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.42■■■□□ 2.3
Trex1Q91XB0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Trex1Q91XB0 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.41■■■□□ 2.3
Trex1Q91XB0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Trex1Q91XB0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Trex1Q91XB0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Trex1Q91XB0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Trex1Q91XB0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Trex1Q91XB0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Trex1Q91XB0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.38■■■□□ 2.29
Trex1Q91XB0 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.38■■■□□ 2.29
Trex1Q91XB0 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.37■■■□□ 2.29
Trex1Q91XB0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Trex1Q91XB0 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.36■■■□□ 2.29
Trex1Q91XB0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Trex1Q91XB0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Trex1Q91XB0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Trex1Q91XB0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Trex1Q91XB0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Trex1Q91XB0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Trex1Q91XB0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Trex1Q91XB0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Trex1Q91XB0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Trex1Q91XB0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Trex1Q91XB0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Trex1Q91XB0 Gm8503-201ENSMUST00000118131 455 ntBASIC29.24■■■□□ 2.27
Trex1Q91XB0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Trex1Q91XB0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.23■■■□□ 2.27
Trex1Q91XB0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Trex1Q91XB0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
Trex1Q91XB0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.21■■■□□ 2.27
Trex1Q91XB0 Gm6821-201ENSMUST00000107540 542 ntBASIC29.2■■■□□ 2.26
Trex1Q91XB0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms