Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Amer2-203ENSMUST00000225247 2662 ntBASIC31.12■■■□□ 2.57
Tmc1Q8R4P5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Tmc1Q8R4P5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.08■■■□□ 2.57
Tmc1Q8R4P5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Tmc1Q8R4P5 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.06■■■□□ 2.56
Tmc1Q8R4P5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tmc1Q8R4P5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tmc1Q8R4P5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
Tmc1Q8R4P5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.03■■■□□ 2.56
Tmc1Q8R4P5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tmc1Q8R4P5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Tmc1Q8R4P5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Tmc1Q8R4P5 Gm24804-201ENSMUST00000174982 85 ntBASIC31.01■■■□□ 2.55
Tmc1Q8R4P5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tmc1Q8R4P5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tmc1Q8R4P5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tmc1Q8R4P5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
Tmc1Q8R4P5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tmc1Q8R4P5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tmc1Q8R4P5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tmc1Q8R4P5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tmc1Q8R4P5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Tmc1Q8R4P5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tmc1Q8R4P5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Tmc1Q8R4P5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.93■■■□□ 2.54
Tmc1Q8R4P5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.92■■■□□ 2.54
Tmc1Q8R4P5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Tmc1Q8R4P5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Tmc1Q8R4P5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Tmc1Q8R4P5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.87■■■□□ 2.53
Tmc1Q8R4P5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Tmc1Q8R4P5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Tmc1Q8R4P5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Tmc1Q8R4P5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.86■■■□□ 2.53
Tmc1Q8R4P5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Tmc1Q8R4P5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Tmc1Q8R4P5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Tmc1Q8R4P5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Tmc1Q8R4P5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tmc1Q8R4P5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Tmc1Q8R4P5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.8■■■□□ 2.52
Tmc1Q8R4P5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Tmc1Q8R4P5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Tmc1Q8R4P5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Tmc1Q8R4P5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Tmc1Q8R4P5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tmc1Q8R4P5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tmc1Q8R4P5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.74■■■□□ 2.51
Tmc1Q8R4P5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tmc1Q8R4P5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Tmc1Q8R4P5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Tmc1Q8R4P5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Tmc1Q8R4P5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Tmc1Q8R4P5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tmc1Q8R4P5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tmc1Q8R4P5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tmc1Q8R4P5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tmc1Q8R4P5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Tmc1Q8R4P5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Tmc1Q8R4P5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Tmc1Q8R4P5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tmc1Q8R4P5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Tmc1Q8R4P5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.64■■■□□ 2.5
Tmc1Q8R4P5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Tmc1Q8R4P5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Tmc1Q8R4P5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Tmc1Q8R4P5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Tmc1Q8R4P5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Tmc1Q8R4P5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Tmc1Q8R4P5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Tmc1Q8R4P5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Tmc1Q8R4P5 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.56■■■□□ 2.48
Tmc1Q8R4P5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
Tmc1Q8R4P5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Tmc1Q8R4P5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Tmc1Q8R4P5 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.55■■■□□ 2.48
Tmc1Q8R4P5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Tmc1Q8R4P5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.54■■■□□ 2.48
Tmc1Q8R4P5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
Tmc1Q8R4P5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.53■■■□□ 2.48
Tmc1Q8R4P5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.53■■■□□ 2.48
Tmc1Q8R4P5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.52■■■□□ 2.48
Tmc1Q8R4P5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Tmc1Q8R4P5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.52■■■□□ 2.48
Tmc1Q8R4P5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Tmc1Q8R4P5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Tmc1Q8R4P5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Tmc1Q8R4P5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Tmc1Q8R4P5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tmc1Q8R4P5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tmc1Q8R4P5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Tmc1Q8R4P5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tmc1Q8R4P5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Tmc1Q8R4P5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Tmc1Q8R4P5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Tmc1Q8R4P5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC30.45■■■□□ 2.47
Tmc1Q8R4P5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Tmc1Q8R4P5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tmc1Q8R4P5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Tmc1Q8R4P5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms