Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Atp2a1Q8R429 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.65■■■□□ 2.18
Atp2a1Q8R429 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Atp2a1Q8R429 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Atp2a1Q8R429 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Atp2a1Q8R429 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Atp2a1Q8R429 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Atp2a1Q8R429 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.6■■■□□ 2.17
Atp2a1Q8R429 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Atp2a1Q8R429 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Atp2a1Q8R429 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Atp2a1Q8R429 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
Atp2a1Q8R429 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Atp2a1Q8R429 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Atp2a1Q8R429 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.57■■■□□ 2.16
Atp2a1Q8R429 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.56■■■□□ 2.16
Atp2a1Q8R429 Gm24970-201ENSMUST00000175582 82 ntBASIC28.56■■■□□ 2.16
Atp2a1Q8R429 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Atp2a1Q8R429 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Atp2a1Q8R429 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Atp2a1Q8R429 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.51■■■□□ 2.15
Atp2a1Q8R429 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Atp2a1Q8R429 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Atp2a1Q8R429 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Atp2a1Q8R429 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Atp2a1Q8R429 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Atp2a1Q8R429 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Atp2a1Q8R429 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Atp2a1Q8R429 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Atp2a1Q8R429 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Atp2a1Q8R429 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Atp2a1Q8R429 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Atp2a1Q8R429 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Atp2a1Q8R429 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Atp2a1Q8R429 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Atp2a1Q8R429 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.43■■■□□ 2.14
Atp2a1Q8R429 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.43■■■□□ 2.14
Atp2a1Q8R429 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Atp2a1Q8R429 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Atp2a1Q8R429 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Atp2a1Q8R429 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Atp2a1Q8R429 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Atp2a1Q8R429 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Atp2a1Q8R429 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.37■■■□□ 2.13
Atp2a1Q8R429 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.37■■■□□ 2.13
Atp2a1Q8R429 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Atp2a1Q8R429 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Atp2a1Q8R429 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.34■■■□□ 2.13
Atp2a1Q8R429 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.33■■■□□ 2.13
Atp2a1Q8R429 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Atp2a1Q8R429 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Atp2a1Q8R429 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Atp2a1Q8R429 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Atp2a1Q8R429 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Atp2a1Q8R429 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Atp2a1Q8R429 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Atp2a1Q8R429 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Atp2a1Q8R429 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.26■■■□□ 2.11
Atp2a1Q8R429 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Atp2a1Q8R429 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Atp2a1Q8R429 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Atp2a1Q8R429 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Atp2a1Q8R429 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Atp2a1Q8R429 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Atp2a1Q8R429 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Atp2a1Q8R429 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Atp2a1Q8R429 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Atp2a1Q8R429 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Atp2a1Q8R429 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Atp2a1Q8R429 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.19■■■□□ 2.1
Atp2a1Q8R429 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Atp2a1Q8R429 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Atp2a1Q8R429 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Atp2a1Q8R429 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.16■■■□□ 2.1
Atp2a1Q8R429 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Atp2a1Q8R429 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Atp2a1Q8R429 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Atp2a1Q8R429 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
Atp2a1Q8R429 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.11■■■□□ 2.09
Atp2a1Q8R429 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp2a1Q8R429 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp2a1Q8R429 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp2a1Q8R429 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.09■■■□□ 2.09
Atp2a1Q8R429 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atp2a1Q8R429 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atp2a1Q8R429 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Atp2a1Q8R429 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.07■■■□□ 2.08
Atp2a1Q8R429 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Atp2a1Q8R429 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
Atp2a1Q8R429 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Atp2a1Q8R429 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Atp2a1Q8R429 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.04■■■□□ 2.08
Atp2a1Q8R429 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Atp2a1Q8R429 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28■■■□□ 2.07
Atp2a1Q8R429 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Atp2a1Q8R429 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Atp2a1Q8R429 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28■■■□□ 2.07
Atp2a1Q8R429 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.99■■■□□ 2.07
Atp2a1Q8R429 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Atp2a1Q8R429 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms