Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rtn4rl1Q8K0S5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn4rl1Q8K0S5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rtn4rl1Q8K0S5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.63■■□□□ 1.85
Rtn4rl1Q8K0S5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Rtn4rl1Q8K0S5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4rl1Q8K0S5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4rl1Q8K0S5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Rtn4rl1Q8K0S5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Rtn4rl1Q8K0S5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn4rl1Q8K0S5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Rtn4rl1Q8K0S5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rtn4rl1Q8K0S5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
Rtn4rl1Q8K0S5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.58■■□□□ 1.85
Rtn4rl1Q8K0S5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.57■■□□□ 1.84
Rtn4rl1Q8K0S5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rtn4rl1Q8K0S5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.56■■□□□ 1.84
Rtn4rl1Q8K0S5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rtn4rl1Q8K0S5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rtn4rl1Q8K0S5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.54■■□□□ 1.84
Rtn4rl1Q8K0S5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rtn4rl1Q8K0S5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rtn4rl1Q8K0S5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rtn4rl1Q8K0S5 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.48■■□□□ 1.83
Rtn4rl1Q8K0S5 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.48■■□□□ 1.83
Rtn4rl1Q8K0S5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rtn4rl1Q8K0S5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
Rtn4rl1Q8K0S5 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.44■■□□□ 1.82
Rtn4rl1Q8K0S5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtn4rl1Q8K0S5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtn4rl1Q8K0S5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtn4rl1Q8K0S5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtn4rl1Q8K0S5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rtn4rl1Q8K0S5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rtn4rl1Q8K0S5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtn4rl1Q8K0S5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Rtn4rl1Q8K0S5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Rtn4rl1Q8K0S5 Gm8503-201ENSMUST00000118131 455 ntBASIC26.36■■□□□ 1.81
Rtn4rl1Q8K0S5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rtn4rl1Q8K0S5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rtn4rl1Q8K0S5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Rtn4rl1Q8K0S5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rtn4rl1Q8K0S5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rtn4rl1Q8K0S5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rtn4rl1Q8K0S5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Rtn4rl1Q8K0S5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rtn4rl1Q8K0S5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rtn4rl1Q8K0S5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rtn4rl1Q8K0S5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.3■■□□□ 1.8
Rtn4rl1Q8K0S5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.29■■□□□ 1.8
Rtn4rl1Q8K0S5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rtn4rl1Q8K0S5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.28■■□□□ 1.8
Rtn4rl1Q8K0S5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Rtn4rl1Q8K0S5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rtn4rl1Q8K0S5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rtn4rl1Q8K0S5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtn4rl1Q8K0S5 Gm6821-201ENSMUST00000107540 542 ntBASIC26.24■■□□□ 1.79
Rtn4rl1Q8K0S5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rtn4rl1Q8K0S5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtn4rl1Q8K0S5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtn4rl1Q8K0S5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rtn4rl1Q8K0S5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.23■■□□□ 1.79
Rtn4rl1Q8K0S5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rtn4rl1Q8K0S5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.21■■□□□ 1.79
Rtn4rl1Q8K0S5 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.21■■□□□ 1.79
Rtn4rl1Q8K0S5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rtn4rl1Q8K0S5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rtn4rl1Q8K0S5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Rtn4rl1Q8K0S5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rtn4rl1Q8K0S5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rtn4rl1Q8K0S5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rtn4rl1Q8K0S5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Rtn4rl1Q8K0S5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rtn4rl1Q8K0S5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rtn4rl1Q8K0S5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rtn4rl1Q8K0S5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
Rtn4rl1Q8K0S5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.13■■□□□ 1.77
Rtn4rl1Q8K0S5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rtn4rl1Q8K0S5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn4rl1Q8K0S5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rtn4rl1Q8K0S5 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.1■■□□□ 1.77
Rtn4rl1Q8K0S5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rtn4rl1Q8K0S5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Rtn4rl1Q8K0S5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rtn4rl1Q8K0S5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Rtn4rl1Q8K0S5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rtn4rl1Q8K0S5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rtn4rl1Q8K0S5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rtn4rl1Q8K0S5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Rtn4rl1Q8K0S5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rtn4rl1Q8K0S5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.04■■□□□ 1.76
Rtn4rl1Q8K0S5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rtn4rl1Q8K0S5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.03■■□□□ 1.76
Rtn4rl1Q8K0S5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rtn4rl1Q8K0S5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.02■■□□□ 1.76
Rtn4rl1Q8K0S5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Rtn4rl1Q8K0S5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtn4rl1Q8K0S5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rtn4rl1Q8K0S5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rtn4rl1Q8K0S5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms