Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.65■■□□□ 1.38
Rfwd3Q8CIK8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rfwd3Q8CIK8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rfwd3Q8CIK8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Rfwd3Q8CIK8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rfwd3Q8CIK8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rfwd3Q8CIK8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rfwd3Q8CIK8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfwd3Q8CIK8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rfwd3Q8CIK8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.59■■□□□ 1.37
Rfwd3Q8CIK8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfwd3Q8CIK8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rfwd3Q8CIK8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.57■■□□□ 1.36
Rfwd3Q8CIK8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfwd3Q8CIK8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Rfwd3Q8CIK8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.55■■□□□ 1.36
Rfwd3Q8CIK8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfwd3Q8CIK8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfwd3Q8CIK8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rfwd3Q8CIK8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rfwd3Q8CIK8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rfwd3Q8CIK8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfwd3Q8CIK8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfwd3Q8CIK8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rfwd3Q8CIK8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rfwd3Q8CIK8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Rfwd3Q8CIK8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Rfwd3Q8CIK8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rfwd3Q8CIK8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Rfwd3Q8CIK8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Rfwd3Q8CIK8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Rfwd3Q8CIK8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfwd3Q8CIK8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfwd3Q8CIK8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfwd3Q8CIK8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfwd3Q8CIK8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.48■■□□□ 1.35
Rfwd3Q8CIK8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rfwd3Q8CIK8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rfwd3Q8CIK8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.47■■□□□ 1.35
Rfwd3Q8CIK8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rfwd3Q8CIK8 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.47■■□□□ 1.35
Rfwd3Q8CIK8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.45■■□□□ 1.35
Rfwd3Q8CIK8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rfwd3Q8CIK8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rfwd3Q8CIK8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rfwd3Q8CIK8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rfwd3Q8CIK8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rfwd3Q8CIK8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rfwd3Q8CIK8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rfwd3Q8CIK8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.42■■□□□ 1.34
Rfwd3Q8CIK8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rfwd3Q8CIK8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rfwd3Q8CIK8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.41■■□□□ 1.34
Rfwd3Q8CIK8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Rfwd3Q8CIK8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.4■■□□□ 1.34
Rfwd3Q8CIK8 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.39■■□□□ 1.33
Rfwd3Q8CIK8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rfwd3Q8CIK8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rfwd3Q8CIK8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rfwd3Q8CIK8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Rfwd3Q8CIK8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rfwd3Q8CIK8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rfwd3Q8CIK8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rfwd3Q8CIK8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.34■■□□□ 1.33
Rfwd3Q8CIK8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rfwd3Q8CIK8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rfwd3Q8CIK8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfwd3Q8CIK8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfwd3Q8CIK8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Rfwd3Q8CIK8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.29■■□□□ 1.32
Rfwd3Q8CIK8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rfwd3Q8CIK8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Rfwd3Q8CIK8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Rfwd3Q8CIK8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfwd3Q8CIK8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rfwd3Q8CIK8 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.25■■□□□ 1.31
Rfwd3Q8CIK8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rfwd3Q8CIK8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rfwd3Q8CIK8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rfwd3Q8CIK8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.24■■□□□ 1.31
Rfwd3Q8CIK8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rfwd3Q8CIK8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfwd3Q8CIK8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rfwd3Q8CIK8 Gm9397-201ENSMUST00000200125 605 ntBASIC23.21■■□□□ 1.31
Rfwd3Q8CIK8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rfwd3Q8CIK8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rfwd3Q8CIK8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rfwd3Q8CIK8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rfwd3Q8CIK8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.19■■□□□ 1.3
Rfwd3Q8CIK8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rfwd3Q8CIK8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Rfwd3Q8CIK8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rfwd3Q8CIK8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rfwd3Q8CIK8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rfwd3Q8CIK8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rfwd3Q8CIK8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfwd3Q8CIK8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rfwd3Q8CIK8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rfwd3Q8CIK8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rfwd3Q8CIK8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms