Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC42.23■■■■■ 4.35
Pabpn1Q8CCS6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC42.23■■■■■ 4.35
Pabpn1Q8CCS6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC42.22■■■■■ 4.35
Pabpn1Q8CCS6 Gm7432-201ENSMUST00000210343 879 ntBASIC42.2■■■■■ 4.35
Pabpn1Q8CCS6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC42.2■■■■■ 4.35
Pabpn1Q8CCS6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC42.19■■■■■ 4.34
Pabpn1Q8CCS6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC42.19■■■■■ 4.34
Pabpn1Q8CCS6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC42.18■■■■■ 4.34
Pabpn1Q8CCS6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC42.17■■■■■ 4.34
Pabpn1Q8CCS6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC42.16■■■■■ 4.34
Pabpn1Q8CCS6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC42.13■■■■■ 4.34
Pabpn1Q8CCS6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC42.13■■■■■ 4.33
Pabpn1Q8CCS6 Gm43863-201ENSMUST00000203822 1192 ntBASIC42.12■■■■■ 4.33
Pabpn1Q8CCS6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC42.11■■■■■ 4.33
Pabpn1Q8CCS6 Cap2-205ENSMUST00000225824 1634 ntBASIC42.1■■■■■ 4.33
Pabpn1Q8CCS6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC42.1■■■■■ 4.33
Pabpn1Q8CCS6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC42.09■■■■■ 4.33
Pabpn1Q8CCS6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC42.09■■■■■ 4.33
Pabpn1Q8CCS6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC42.08■■■■■ 4.33
Pabpn1Q8CCS6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC42.07■■■■■ 4.33
Pabpn1Q8CCS6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC42.07■■■■■ 4.33
Pabpn1Q8CCS6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC42.05■■■■■ 4.32
Pabpn1Q8CCS6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC42.03■■■■■ 4.32
Pabpn1Q8CCS6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC42.02■■■■■ 4.32
Pabpn1Q8CCS6 Gm11175-201ENSMUST00000116172 543 ntBASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC42■■■■■ 4.31
Pabpn1Q8CCS6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC41.99■■■■■ 4.31
Pabpn1Q8CCS6 Gm15039-201ENSMUST00000118914 875 ntBASIC41.99■■■■■ 4.31
Pabpn1Q8CCS6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC41.95■■■■■ 4.31
Pabpn1Q8CCS6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC41.95■■■■■ 4.31
Pabpn1Q8CCS6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC41.94■■■■■ 4.3
Pabpn1Q8CCS6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
Pabpn1Q8CCS6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC41.93■■■■■ 4.3
Pabpn1Q8CCS6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC41.92■■■■■ 4.3
Pabpn1Q8CCS6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC41.88■■■■■ 4.29
Pabpn1Q8CCS6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
Pabpn1Q8CCS6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC41.86■■■■■ 4.29
Pabpn1Q8CCS6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
Pabpn1Q8CCS6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC41.82■■■■■ 4.29
Pabpn1Q8CCS6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC41.82■■■■■ 4.29
Pabpn1Q8CCS6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
Pabpn1Q8CCS6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC41.8■■■■■ 4.28
Pabpn1Q8CCS6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC41.77■■■■■ 4.28
Pabpn1Q8CCS6 Gm11599-201ENSMUST00000118720 878 ntBASIC41.76■■■■■ 4.28
Pabpn1Q8CCS6 Nkain2-201ENSMUST00000092602 558 ntBASIC41.75■■■■■ 4.27
Pabpn1Q8CCS6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC41.75■■■■■ 4.27
Pabpn1Q8CCS6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC41.74■■■■■ 4.27
Pabpn1Q8CCS6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.7■■■■■ 4.27
Pabpn1Q8CCS6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC41.7■■■■■ 4.27
Pabpn1Q8CCS6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC41.66■■■■■ 4.26
Pabpn1Q8CCS6 AC157572.2-201ENSMUST00000226970 908 ntBASIC41.65■■■■■ 4.26
Pabpn1Q8CCS6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC41.63■■■■■ 4.25
Pabpn1Q8CCS6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC41.61■■■■■ 4.25
Pabpn1Q8CCS6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC41.61■■■■■ 4.25
Pabpn1Q8CCS6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC41.59■■■■■ 4.25
Pabpn1Q8CCS6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC41.56■■■■■ 4.24
Pabpn1Q8CCS6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
Pabpn1Q8CCS6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pabpn1Q8CCS6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pabpn1Q8CCS6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC41.49■■■■■ 4.23
Pabpn1Q8CCS6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC41.47■■■■■ 4.23
Pabpn1Q8CCS6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC41.46■■■■■ 4.23
Pabpn1Q8CCS6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC41.45■■■■■ 4.23
Pabpn1Q8CCS6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
Pabpn1Q8CCS6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
Pabpn1Q8CCS6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC41.4■■■■■ 4.22
Pabpn1Q8CCS6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC41.38■■■■■ 4.22
Pabpn1Q8CCS6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC41.38■■■■■ 4.21
Pabpn1Q8CCS6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC41.38■■■■■ 4.21
Pabpn1Q8CCS6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
Pabpn1Q8CCS6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC41.36■■■■■ 4.21
Pabpn1Q8CCS6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
Pabpn1Q8CCS6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC41.31■■■■■ 4.2
Pabpn1Q8CCS6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Pabpn1Q8CCS6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC41.28■■■■■ 4.2
Pabpn1Q8CCS6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC41.23■■■■■ 4.19
Pabpn1Q8CCS6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC41.19■■■■■ 4.18
Pabpn1Q8CCS6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC41.18■■■■■ 4.18
Pabpn1Q8CCS6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC41.18■■■■■ 4.18
Pabpn1Q8CCS6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC41.17■■■■■ 4.18
Pabpn1Q8CCS6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC41.17■■■■■ 4.18
Pabpn1Q8CCS6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Pabpn1Q8CCS6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Pabpn1Q8CCS6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Pabpn1Q8CCS6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC41.15■■■■■ 4.18
Pabpn1Q8CCS6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC41.15■■■■■ 4.18
Pabpn1Q8CCS6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC41.12■■■■■ 4.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms