Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Uba3Q8C878 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Uba3Q8C878 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Uba3Q8C878 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
Uba3Q8C878 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Uba3Q8C878 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.85■■□□□ 1.89
Uba3Q8C878 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Uba3Q8C878 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
Uba3Q8C878 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Uba3Q8C878 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Uba3Q8C878 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Uba3Q8C878 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Uba3Q8C878 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.8■■□□□ 1.88
Uba3Q8C878 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.79■■□□□ 1.88
Uba3Q8C878 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uba3Q8C878 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.79■■□□□ 1.88
Uba3Q8C878 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uba3Q8C878 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uba3Q8C878 Zfp131-205ENSMUST00000223812 663 ntBASIC26.79■■□□□ 1.88
Uba3Q8C878 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Uba3Q8C878 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Uba3Q8C878 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.77■■□□□ 1.88
Uba3Q8C878 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Uba3Q8C878 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uba3Q8C878 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uba3Q8C878 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Uba3Q8C878 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Uba3Q8C878 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.73■■□□□ 1.87
Uba3Q8C878 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Uba3Q8C878 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Uba3Q8C878 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Uba3Q8C878 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Uba3Q8C878 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.69■■□□□ 1.86
Uba3Q8C878 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Uba3Q8C878 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Uba3Q8C878 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.68■■□□□ 1.86
Uba3Q8C878 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Uba3Q8C878 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.67■■□□□ 1.86
Uba3Q8C878 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Uba3Q8C878 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Uba3Q8C878 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Uba3Q8C878 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Uba3Q8C878 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Uba3Q8C878 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Uba3Q8C878 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Uba3Q8C878 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Uba3Q8C878 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Uba3Q8C878 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Uba3Q8C878 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Uba3Q8C878 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Uba3Q8C878 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Uba3Q8C878 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Uba3Q8C878 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.58■■□□□ 1.85
Uba3Q8C878 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Uba3Q8C878 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Uba3Q8C878 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Uba3Q8C878 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Uba3Q8C878 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
Uba3Q8C878 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Uba3Q8C878 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Uba3Q8C878 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Uba3Q8C878 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Uba3Q8C878 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Uba3Q8C878 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Uba3Q8C878 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Uba3Q8C878 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Uba3Q8C878 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.47■■□□□ 1.83
Uba3Q8C878 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Uba3Q8C878 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Uba3Q8C878 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Uba3Q8C878 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Uba3Q8C878 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.44■■□□□ 1.82
Uba3Q8C878 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Uba3Q8C878 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.43■■□□□ 1.82
Uba3Q8C878 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Uba3Q8C878 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.43■■□□□ 1.82
Uba3Q8C878 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Uba3Q8C878 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Uba3Q8C878 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Uba3Q8C878 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Uba3Q8C878 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Uba3Q8C878 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Uba3Q8C878 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Uba3Q8C878 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Uba3Q8C878 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Uba3Q8C878 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Uba3Q8C878 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.34■■□□□ 1.81
Uba3Q8C878 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Uba3Q8C878 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Uba3Q8C878 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.31■■□□□ 1.8
Uba3Q8C878 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Uba3Q8C878 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Uba3Q8C878 Gm9397-201ENSMUST00000200125 605 ntBASIC26.29■■□□□ 1.8
Uba3Q8C878 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Uba3Q8C878 Zxda-201ENSMUST00000117281 2621 ntBASIC26.29■■□□□ 1.8
Uba3Q8C878 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
Uba3Q8C878 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Uba3Q8C878 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Uba3Q8C878 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Uba3Q8C878 Gm45855-201ENSMUST00000212546 880 ntBASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms