Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.7■■■□□ 2.82
Ccdc60Q8C4J0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ccdc60Q8C4J0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ccdc60Q8C4J0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ccdc60Q8C4J0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ccdc60Q8C4J0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ccdc60Q8C4J0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.63■■■□□ 2.81
Ccdc60Q8C4J0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ccdc60Q8C4J0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ccdc60Q8C4J0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
Ccdc60Q8C4J0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.61■■■□□ 2.81
Ccdc60Q8C4J0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Ccdc60Q8C4J0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ccdc60Q8C4J0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
Ccdc60Q8C4J0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.59■■■□□ 2.81
Ccdc60Q8C4J0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ccdc60Q8C4J0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ccdc60Q8C4J0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.56■■■□□ 2.8
Ccdc60Q8C4J0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.56■■■□□ 2.8
Ccdc60Q8C4J0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc60Q8C4J0 Zfp131-205ENSMUST00000223812 663 ntBASIC32.51■■■□□ 2.79
Ccdc60Q8C4J0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ccdc60Q8C4J0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ccdc60Q8C4J0 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.5■■■□□ 2.79
Ccdc60Q8C4J0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Ccdc60Q8C4J0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
Ccdc60Q8C4J0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ccdc60Q8C4J0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Ccdc60Q8C4J0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Ccdc60Q8C4J0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Ccdc60Q8C4J0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Ccdc60Q8C4J0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc60Q8C4J0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ccdc60Q8C4J0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc60Q8C4J0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc60Q8C4J0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Ccdc60Q8C4J0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc60Q8C4J0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc60Q8C4J0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc60Q8C4J0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc60Q8C4J0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc60Q8C4J0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc60Q8C4J0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc60Q8C4J0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Ccdc60Q8C4J0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc60Q8C4J0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.32■■■□□ 2.76
Ccdc60Q8C4J0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc60Q8C4J0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc60Q8C4J0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.28■■■□□ 2.76
Ccdc60Q8C4J0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc60Q8C4J0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc60Q8C4J0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc60Q8C4J0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc60Q8C4J0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.24■■■□□ 2.75
Ccdc60Q8C4J0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Ccdc60Q8C4J0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.23■■■□□ 2.75
Ccdc60Q8C4J0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
Ccdc60Q8C4J0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ccdc60Q8C4J0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ccdc60Q8C4J0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ccdc60Q8C4J0 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.18■■■□□ 2.74
Ccdc60Q8C4J0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc60Q8C4J0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc60Q8C4J0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc60Q8C4J0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ccdc60Q8C4J0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ccdc60Q8C4J0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Ccdc60Q8C4J0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ccdc60Q8C4J0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
Ccdc60Q8C4J0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ccdc60Q8C4J0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ccdc60Q8C4J0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc60Q8C4J0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc60Q8C4J0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc60Q8C4J0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc60Q8C4J0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.08■■■□□ 2.73
Ccdc60Q8C4J0 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.07■■■□□ 2.72
Ccdc60Q8C4J0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ccdc60Q8C4J0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc60Q8C4J0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc60Q8C4J0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc60Q8C4J0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Zxda-201ENSMUST00000117281 2621 ntBASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc60Q8C4J0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc60Q8C4J0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 Gm9397-201ENSMUST00000200125 605 ntBASIC31.94■■■□□ 2.7
Ccdc60Q8C4J0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc60Q8C4J0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.92■■■□□ 2.7
Ccdc60Q8C4J0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms