Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Usp44Q8C2S0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Usp44Q8C2S0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Usp44Q8C2S0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Usp44Q8C2S0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp44Q8C2S0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Usp44Q8C2S0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.25■■■□□ 2.43
Usp44Q8C2S0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.25■■■□□ 2.43
Usp44Q8C2S0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.25■■■□□ 2.43
Usp44Q8C2S0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Usp44Q8C2S0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Usp44Q8C2S0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Usp44Q8C2S0 Gm16148-201ENSMUST00000119653 893 ntBASIC30.23■■■□□ 2.43
Usp44Q8C2S0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Usp44Q8C2S0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
Usp44Q8C2S0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Usp44Q8C2S0 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.17■■■□□ 2.42
Usp44Q8C2S0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Usp44Q8C2S0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Usp44Q8C2S0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Usp44Q8C2S0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Usp44Q8C2S0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Usp44Q8C2S0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Usp44Q8C2S0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Usp44Q8C2S0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Usp44Q8C2S0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Usp44Q8C2S0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.06■■■□□ 2.4
Usp44Q8C2S0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Usp44Q8C2S0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp44Q8C2S0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Usp44Q8C2S0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Usp44Q8C2S0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Usp44Q8C2S0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Usp44Q8C2S0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp44Q8C2S0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp44Q8C2S0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Usp44Q8C2S0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Usp44Q8C2S0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Usp44Q8C2S0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Usp44Q8C2S0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.97■■■□□ 2.39
Usp44Q8C2S0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Usp44Q8C2S0 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.96■■■□□ 2.39
Usp44Q8C2S0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Usp44Q8C2S0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Usp44Q8C2S0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Usp44Q8C2S0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Usp44Q8C2S0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
Usp44Q8C2S0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Usp44Q8C2S0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Usp44Q8C2S0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
Usp44Q8C2S0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Usp44Q8C2S0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp44Q8C2S0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp44Q8C2S0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp44Q8C2S0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Usp44Q8C2S0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Usp44Q8C2S0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
Usp44Q8C2S0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Usp44Q8C2S0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Usp44Q8C2S0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Usp44Q8C2S0 Zxda-201ENSMUST00000117281 2621 ntBASIC29.83■■■□□ 2.37
Usp44Q8C2S0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Usp44Q8C2S0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Usp44Q8C2S0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Usp44Q8C2S0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Usp44Q8C2S0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.81■■■□□ 2.36
Usp44Q8C2S0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.8■■■□□ 2.36
Usp44Q8C2S0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Usp44Q8C2S0 Zfp131-205ENSMUST00000223812 663 ntBASIC29.77■■■□□ 2.36
Usp44Q8C2S0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Usp44Q8C2S0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
Usp44Q8C2S0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Usp44Q8C2S0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Usp44Q8C2S0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Usp44Q8C2S0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Usp44Q8C2S0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Usp44Q8C2S0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Usp44Q8C2S0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Usp44Q8C2S0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Usp44Q8C2S0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Usp44Q8C2S0 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.67■■■□□ 2.34
Usp44Q8C2S0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Usp44Q8C2S0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Usp44Q8C2S0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Usp44Q8C2S0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Usp44Q8C2S0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Usp44Q8C2S0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
Usp44Q8C2S0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Usp44Q8C2S0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Usp44Q8C2S0 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.63■■■□□ 2.33
Usp44Q8C2S0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
Usp44Q8C2S0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Usp44Q8C2S0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Usp44Q8C2S0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Usp44Q8C2S0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Usp44Q8C2S0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.6■■■□□ 2.33
Usp44Q8C2S0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.6■■■□□ 2.33
Usp44Q8C2S0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Usp44Q8C2S0 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.59■■■□□ 2.33
Usp44Q8C2S0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.59■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms