Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Cpne1Q8C166 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.64■■□□□ 1.37
Cpne1Q8C166 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.64■■□□□ 1.37
Cpne1Q8C166 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpne1Q8C166 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpne1Q8C166 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpne1Q8C166 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpne1Q8C166 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpne1Q8C166 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpne1Q8C166 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpne1Q8C166 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpne1Q8C166 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpne1Q8C166 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.6■■□□□ 1.37
Cpne1Q8C166 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Cpne1Q8C166 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpne1Q8C166 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cpne1Q8C166 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Cpne1Q8C166 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpne1Q8C166 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpne1Q8C166 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpne1Q8C166 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
Cpne1Q8C166 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Cpne1Q8C166 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpne1Q8C166 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Cpne1Q8C166 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.54■■□□□ 1.36
Cpne1Q8C166 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpne1Q8C166 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpne1Q8C166 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpne1Q8C166 Zfp131-205ENSMUST00000223812 663 ntBASIC23.5■■□□□ 1.35
Cpne1Q8C166 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpne1Q8C166 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.49■■□□□ 1.35
Cpne1Q8C166 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cpne1Q8C166 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Cpne1Q8C166 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cpne1Q8C166 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Cpne1Q8C166 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cpne1Q8C166 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Cpne1Q8C166 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.46■■□□□ 1.35
Cpne1Q8C166 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cpne1Q8C166 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Cpne1Q8C166 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne1Q8C166 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne1Q8C166 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne1Q8C166 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.43■■□□□ 1.34
Cpne1Q8C166 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cpne1Q8C166 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cpne1Q8C166 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cpne1Q8C166 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Cpne1Q8C166 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cpne1Q8C166 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Cpne1Q8C166 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Cpne1Q8C166 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.38■■□□□ 1.33
Cpne1Q8C166 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cpne1Q8C166 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cpne1Q8C166 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cpne1Q8C166 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpne1Q8C166 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.36■■□□□ 1.33
Cpne1Q8C166 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpne1Q8C166 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cpne1Q8C166 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cpne1Q8C166 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cpne1Q8C166 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Cpne1Q8C166 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.32■■□□□ 1.32
Cpne1Q8C166 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cpne1Q8C166 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpne1Q8C166 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.29■■□□□ 1.32
Cpne1Q8C166 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpne1Q8C166 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Cpne1Q8C166 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpne1Q8C166 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpne1Q8C166 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cpne1Q8C166 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cpne1Q8C166 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cpne1Q8C166 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cpne1Q8C166 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cpne1Q8C166 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Cpne1Q8C166 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cpne1Q8C166 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cpne1Q8C166 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cpne1Q8C166 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpne1Q8C166 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.22■■□□□ 1.31
Cpne1Q8C166 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.22■■□□□ 1.31
Cpne1Q8C166 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cpne1Q8C166 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cpne1Q8C166 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cpne1Q8C166 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cpne1Q8C166 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.2■■□□□ 1.3
Cpne1Q8C166 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cpne1Q8C166 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Cpne1Q8C166 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cpne1Q8C166 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cpne1Q8C166 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.16■■□□□ 1.3
Cpne1Q8C166 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cpne1Q8C166 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cpne1Q8C166 Zxda-201ENSMUST00000117281 2621 ntBASIC23.16■■□□□ 1.3
Cpne1Q8C166 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cpne1Q8C166 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cpne1Q8C166 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Cpne1Q8C166 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cpne1Q8C166 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms