Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrtm1Q8BXQ3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrtm1Q8BXQ3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrtm1Q8BXQ3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrtm1Q8BXQ3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lrtm1Q8BXQ3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Lrtm1Q8BXQ3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.27■■□□□ 1.16
Lrtm1Q8BXQ3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Lrtm1Q8BXQ3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Lrtm1Q8BXQ3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lrtm1Q8BXQ3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
Lrtm1Q8BXQ3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrtm1Q8BXQ3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.25■■□□□ 1.15
Lrtm1Q8BXQ3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.25■■□□□ 1.15
Lrtm1Q8BXQ3 Zfp131-205ENSMUST00000223812 663 ntBASIC22.25■■□□□ 1.15
Lrtm1Q8BXQ3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrtm1Q8BXQ3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrtm1Q8BXQ3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrtm1Q8BXQ3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Lrtm1Q8BXQ3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lrtm1Q8BXQ3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.22■■□□□ 1.15
Lrtm1Q8BXQ3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrtm1Q8BXQ3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrtm1Q8BXQ3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lrtm1Q8BXQ3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lrtm1Q8BXQ3 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.19■■□□□ 1.14
Lrtm1Q8BXQ3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrtm1Q8BXQ3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrtm1Q8BXQ3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Lrtm1Q8BXQ3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lrtm1Q8BXQ3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lrtm1Q8BXQ3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lrtm1Q8BXQ3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.16■■□□□ 1.14
Lrtm1Q8BXQ3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Lrtm1Q8BXQ3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.14■■□□□ 1.13
Lrtm1Q8BXQ3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Lrtm1Q8BXQ3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Lrtm1Q8BXQ3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Lrtm1Q8BXQ3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrtm1Q8BXQ3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.12■■□□□ 1.13
Lrtm1Q8BXQ3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lrtm1Q8BXQ3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrtm1Q8BXQ3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.11■■□□□ 1.13
Lrtm1Q8BXQ3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrtm1Q8BXQ3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Lrtm1Q8BXQ3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrtm1Q8BXQ3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lrtm1Q8BXQ3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lrtm1Q8BXQ3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrtm1Q8BXQ3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrtm1Q8BXQ3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrtm1Q8BXQ3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrtm1Q8BXQ3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Lrtm1Q8BXQ3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrtm1Q8BXQ3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Lrtm1Q8BXQ3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Lrtm1Q8BXQ3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrtm1Q8BXQ3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lrtm1Q8BXQ3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.02■■□□□ 1.12
Lrtm1Q8BXQ3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrtm1Q8BXQ3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrtm1Q8BXQ3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Lrtm1Q8BXQ3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lrtm1Q8BXQ3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lrtm1Q8BXQ3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Lrtm1Q8BXQ3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.97■■□□□ 1.11
Lrtm1Q8BXQ3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrtm1Q8BXQ3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Lrtm1Q8BXQ3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrtm1Q8BXQ3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrtm1Q8BXQ3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrtm1Q8BXQ3 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.92■■□□□ 1.1
Lrtm1Q8BXQ3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrtm1Q8BXQ3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.92■■□□□ 1.1
Lrtm1Q8BXQ3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrtm1Q8BXQ3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrtm1Q8BXQ3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Lrtm1Q8BXQ3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrtm1Q8BXQ3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lrtm1Q8BXQ3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lrtm1Q8BXQ3 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.89■■□□□ 1.09
Lrtm1Q8BXQ3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lrtm1Q8BXQ3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lrtm1Q8BXQ3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lrtm1Q8BXQ3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lrtm1Q8BXQ3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.87■■□□□ 1.09
Lrtm1Q8BXQ3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.87■■□□□ 1.09
Lrtm1Q8BXQ3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrtm1Q8BXQ3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrtm1Q8BXQ3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrtm1Q8BXQ3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrtm1Q8BXQ3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrtm1Q8BXQ3 Gm9397-201ENSMUST00000200125 605 ntBASIC21.85■■□□□ 1.09
Lrtm1Q8BXQ3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Lrtm1Q8BXQ3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lrtm1Q8BXQ3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrtm1Q8BXQ3 Zxda-201ENSMUST00000117281 2621 ntBASIC21.81■■□□□ 1.08
Lrtm1Q8BXQ3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.81■■□□□ 1.08
Lrtm1Q8BXQ3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lrtm1Q8BXQ3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms