Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.75■■■□□ 2.19
Lrch3Q8BVU0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Lrch3Q8BVU0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Lrch3Q8BVU0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lrch3Q8BVU0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Lrch3Q8BVU0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.7■■■□□ 2.18
Lrch3Q8BVU0 Mir6538-201ENSMUST00000183713 110 ntBASIC28.69■■■□□ 2.18
Lrch3Q8BVU0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Lrch3Q8BVU0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Lrch3Q8BVU0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Lrch3Q8BVU0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Lrch3Q8BVU0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.68■■■□□ 2.18
Lrch3Q8BVU0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Lrch3Q8BVU0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Lrch3Q8BVU0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Lrch3Q8BVU0 Cap2-205ENSMUST00000225824 1634 ntBASIC28.65■■■□□ 2.18
Lrch3Q8BVU0 Gm11175-201ENSMUST00000116172 543 ntBASIC28.65■■■□□ 2.18
Lrch3Q8BVU0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Lrch3Q8BVU0 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.64■■■□□ 2.18
Lrch3Q8BVU0 Gm7432-201ENSMUST00000210343 879 ntBASIC28.64■■■□□ 2.18
Lrch3Q8BVU0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.17
Lrch3Q8BVU0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Lrch3Q8BVU0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Lrch3Q8BVU0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.62■■■□□ 2.17
Lrch3Q8BVU0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Lrch3Q8BVU0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Lrch3Q8BVU0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
Lrch3Q8BVU0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Lrch3Q8BVU0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Lrch3Q8BVU0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Lrch3Q8BVU0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lrch3Q8BVU0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.58■■■□□ 2.17
Lrch3Q8BVU0 Gm15039-201ENSMUST00000118914 875 ntBASIC28.57■■■□□ 2.16
Lrch3Q8BVU0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Lrch3Q8BVU0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.54■■■□□ 2.16
Lrch3Q8BVU0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Lrch3Q8BVU0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.53■■■□□ 2.16
Lrch3Q8BVU0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lrch3Q8BVU0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.51■■■□□ 2.15
Lrch3Q8BVU0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Lrch3Q8BVU0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Lrch3Q8BVU0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lrch3Q8BVU0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lrch3Q8BVU0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.49■■■□□ 2.15
Lrch3Q8BVU0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Lrch3Q8BVU0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Lrch3Q8BVU0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Lrch3Q8BVU0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Lrch3Q8BVU0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
Lrch3Q8BVU0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Lrch3Q8BVU0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Lrch3Q8BVU0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Lrch3Q8BVU0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Lrch3Q8BVU0 Nkain2-201ENSMUST00000092602 558 ntBASIC28.38■■■□□ 2.13
Lrch3Q8BVU0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Lrch3Q8BVU0 Gm11599-201ENSMUST00000118720 878 ntBASIC28.37■■■□□ 2.13
Lrch3Q8BVU0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Lrch3Q8BVU0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Lrch3Q8BVU0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lrch3Q8BVU0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.34■■■□□ 2.13
Lrch3Q8BVU0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Lrch3Q8BVU0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Lrch3Q8BVU0 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.32■■■□□ 2.12
Lrch3Q8BVU0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Lrch3Q8BVU0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Lrch3Q8BVU0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Lrch3Q8BVU0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Lrch3Q8BVU0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Lrch3Q8BVU0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Lrch3Q8BVU0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
Lrch3Q8BVU0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Lrch3Q8BVU0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrch3Q8BVU0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrch3Q8BVU0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lrch3Q8BVU0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.24■■■□□ 2.11
Lrch3Q8BVU0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lrch3Q8BVU0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.23■■■□□ 2.11
Lrch3Q8BVU0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Lrch3Q8BVU0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Lrch3Q8BVU0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Lrch3Q8BVU0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Lrch3Q8BVU0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.2■■■□□ 2.1
Lrch3Q8BVU0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Lrch3Q8BVU0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lrch3Q8BVU0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrch3Q8BVU0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Lrch3Q8BVU0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Lrch3Q8BVU0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Lrch3Q8BVU0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.12■■■□□ 2.09
Lrch3Q8BVU0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Lrch3Q8BVU0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
Lrch3Q8BVU0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lrch3Q8BVU0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Lrch3Q8BVU0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Lrch3Q8BVU0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.05■■■□□ 2.08
Lrch3Q8BVU0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.04■■■□□ 2.08
Lrch3Q8BVU0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Lrch3Q8BVU0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Lrch3Q8BVU0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Lrch3Q8BVU0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 421.7 ms