Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cpsf7Q8BTV2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Cpsf7Q8BTV2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cpsf7Q8BTV2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cpsf7Q8BTV2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cpsf7Q8BTV2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cpsf7Q8BTV2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.32■■□□□ 1.64
Cpsf7Q8BTV2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cpsf7Q8BTV2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cpsf7Q8BTV2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.31■■□□□ 1.64
Cpsf7Q8BTV2 Gm8109-201ENSMUST00000194076 746 ntBASIC25.29■■□□□ 1.64
Cpsf7Q8BTV2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.29■■□□□ 1.64
Cpsf7Q8BTV2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cpsf7Q8BTV2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cpsf7Q8BTV2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cpsf7Q8BTV2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cpsf7Q8BTV2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Cpsf7Q8BTV2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpsf7Q8BTV2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpsf7Q8BTV2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Cpsf7Q8BTV2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cpsf7Q8BTV2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cpsf7Q8BTV2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cpsf7Q8BTV2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cpsf7Q8BTV2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.2■■□□□ 1.62
Cpsf7Q8BTV2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf7Q8BTV2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf7Q8BTV2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cpsf7Q8BTV2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.17■■□□□ 1.62
Cpsf7Q8BTV2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Cpsf7Q8BTV2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf7Q8BTV2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf7Q8BTV2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf7Q8BTV2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf7Q8BTV2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf7Q8BTV2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf7Q8BTV2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Cpsf7Q8BTV2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.13■■□□□ 1.61
Cpsf7Q8BTV2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Cpsf7Q8BTV2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf7Q8BTV2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf7Q8BTV2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Cpsf7Q8BTV2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cpsf7Q8BTV2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cpsf7Q8BTV2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cpsf7Q8BTV2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
Cpsf7Q8BTV2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.03■■□□□ 1.6
Cpsf7Q8BTV2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cpsf7Q8BTV2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cpsf7Q8BTV2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
Cpsf7Q8BTV2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cpsf7Q8BTV2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Cpsf7Q8BTV2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25■■□□□ 1.59
Cpsf7Q8BTV2 Gm30346-201ENSMUST00000218641 1699 ntBASIC25■■□□□ 1.59
Cpsf7Q8BTV2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cpsf7Q8BTV2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cpsf7Q8BTV2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.98■■□□□ 1.59
Cpsf7Q8BTV2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cpsf7Q8BTV2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cpsf7Q8BTV2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cpsf7Q8BTV2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cpsf7Q8BTV2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cpsf7Q8BTV2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Cpsf7Q8BTV2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cpsf7Q8BTV2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cpsf7Q8BTV2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Cpsf7Q8BTV2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cpsf7Q8BTV2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Cpsf7Q8BTV2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cpsf7Q8BTV2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cpsf7Q8BTV2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cpsf7Q8BTV2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 Gm27322-201ENSMUST00000184007 104 ntBASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cpsf7Q8BTV2 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.88■■□□□ 1.57
Cpsf7Q8BTV2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms