Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Nhlrc1Q8BR37 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Nhlrc1Q8BR37 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.58■□□□□ 0.72
Nhlrc1Q8BR37 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nhlrc1Q8BR37 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nhlrc1Q8BR37 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nhlrc1Q8BR37 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.57■□□□□ 0.72
Nhlrc1Q8BR37 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nhlrc1Q8BR37 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nhlrc1Q8BR37 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.55■□□□□ 0.72
Nhlrc1Q8BR37 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlrc1Q8BR37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nhlrc1Q8BR37 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.55■□□□□ 0.72
Nhlrc1Q8BR37 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nhlrc1Q8BR37 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nhlrc1Q8BR37 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nhlrc1Q8BR37 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Nhlrc1Q8BR37 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nhlrc1Q8BR37 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nhlrc1Q8BR37 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nhlrc1Q8BR37 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nhlrc1Q8BR37 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.51■□□□□ 0.71
Nhlrc1Q8BR37 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhlrc1Q8BR37 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhlrc1Q8BR37 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nhlrc1Q8BR37 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhlrc1Q8BR37 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nhlrc1Q8BR37 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlrc1Q8BR37 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nhlrc1Q8BR37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nhlrc1Q8BR37 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.47■□□□□ 0.71
Nhlrc1Q8BR37 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhlrc1Q8BR37 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nhlrc1Q8BR37 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Nhlrc1Q8BR37 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhlrc1Q8BR37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhlrc1Q8BR37 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nhlrc1Q8BR37 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nhlrc1Q8BR37 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.41■□□□□ 0.7
Nhlrc1Q8BR37 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.4■□□□□ 0.7
Nhlrc1Q8BR37 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhlrc1Q8BR37 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nhlrc1Q8BR37 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nhlrc1Q8BR37 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.38■□□□□ 0.69
Nhlrc1Q8BR37 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhlrc1Q8BR37 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhlrc1Q8BR37 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.35■□□□□ 0.69
Nhlrc1Q8BR37 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nhlrc1Q8BR37 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhlrc1Q8BR37 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.35■□□□□ 0.69
Nhlrc1Q8BR37 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nhlrc1Q8BR37 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhlrc1Q8BR37 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nhlrc1Q8BR37 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhlrc1Q8BR37 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhlrc1Q8BR37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhlrc1Q8BR37 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhlrc1Q8BR37 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nhlrc1Q8BR37 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhlrc1Q8BR37 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.29■□□□□ 0.68
Nhlrc1Q8BR37 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nhlrc1Q8BR37 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlrc1Q8BR37 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlrc1Q8BR37 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlrc1Q8BR37 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlrc1Q8BR37 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nhlrc1Q8BR37 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nhlrc1Q8BR37 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nhlrc1Q8BR37 Zxda-201ENSMUST00000117281 2621 ntBASIC19.27■□□□□ 0.68
Nhlrc1Q8BR37 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nhlrc1Q8BR37 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nhlrc1Q8BR37 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.25■□□□□ 0.67
Nhlrc1Q8BR37 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlrc1Q8BR37 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlrc1Q8BR37 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.24■□□□□ 0.67
Nhlrc1Q8BR37 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlrc1Q8BR37 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlrc1Q8BR37 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlrc1Q8BR37 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nhlrc1Q8BR37 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nhlrc1Q8BR37 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nhlrc1Q8BR37 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nhlrc1Q8BR37 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nhlrc1Q8BR37 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Nhlrc1Q8BR37 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nhlrc1Q8BR37 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlrc1Q8BR37 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlrc1Q8BR37 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlrc1Q8BR37 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nhlrc1Q8BR37 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhlrc1Q8BR37 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhlrc1Q8BR37 Gm8503-201ENSMUST00000118131 455 ntBASIC19.19■□□□□ 0.66
Nhlrc1Q8BR37 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Nhlrc1Q8BR37 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhlrc1Q8BR37 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhlrc1Q8BR37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nhlrc1Q8BR37 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhlrc1Q8BR37 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhlrc1Q8BR37 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhlrc1Q8BR37 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms