Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34,94■■■■□ 3,18
Col16a1Q8BLX7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34,94■■■■□ 3,18
Col16a1Q8BLX7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC34,93■■■■□ 3,18
Col16a1Q8BLX7 Gm8503-201ENSMUST00000118131 455 ntBASIC34,93■■■■□ 3,18
Col16a1Q8BLX7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC34,93■■■■□ 3,18
Col16a1Q8BLX7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC34,92■■■■□ 3,18
Col16a1Q8BLX7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC34,91■■■■□ 3,18
Col16a1Q8BLX7 Gm9939-201ENSMUST00000067161 1154 ntBASIC34,9■■■■□ 3,18
Col16a1Q8BLX7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC34,9■■■■□ 3,18
Col16a1Q8BLX7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC34,89■■■■□ 3,18
Col16a1Q8BLX7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC34,89■■■■□ 3,18
Col16a1Q8BLX7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC34,86■■■■□ 3,17
Col16a1Q8BLX7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC34,86■■■■□ 3,17
Col16a1Q8BLX7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Col16a1Q8BLX7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC34,83■■■■□ 3,17
Col16a1Q8BLX7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC34,82■■■■□ 3,17
Col16a1Q8BLX7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC34,82■■■■□ 3,16
Col16a1Q8BLX7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC34,82■■■■□ 3,16
Col16a1Q8BLX7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC34,82■■■■□ 3,16
Col16a1Q8BLX7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC34,8■■■■□ 3,16
Col16a1Q8BLX7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC34,79■■■■□ 3,16
Col16a1Q8BLX7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC34,79■■■■□ 3,16
Col16a1Q8BLX7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34,79■■■■□ 3,16
Col16a1Q8BLX7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34,78■■■■□ 3,16
Col16a1Q8BLX7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC34,78■■■■□ 3,16
Col16a1Q8BLX7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC34,77■■■■□ 3,16
Col16a1Q8BLX7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC34,75■■■■□ 3,15
Col16a1Q8BLX7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC34,75■■■■□ 3,15
Col16a1Q8BLX7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC34,74■■■■□ 3,15
Col16a1Q8BLX7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Col16a1Q8BLX7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC34,73■■■■□ 3,15
Col16a1Q8BLX7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC34,72■■■■□ 3,15
Col16a1Q8BLX7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC34,71■■■■□ 3,15
Col16a1Q8BLX7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC34,7■■■■□ 3,15
Col16a1Q8BLX7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC34,66■■■■□ 3,14
Col16a1Q8BLX7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Col16a1Q8BLX7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC34,64■■■■□ 3,14
Col16a1Q8BLX7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC34,64■■■■□ 3,14
Col16a1Q8BLX7 Gm43863-201ENSMUST00000203822 1192 ntBASIC34,63■■■■□ 3,13
Col16a1Q8BLX7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC34,63■■■■□ 3,13
Col16a1Q8BLX7 Gm6821-201ENSMUST00000107540 542 ntBASIC34,62■■■■□ 3,13
Col16a1Q8BLX7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC34,61■■■■□ 3,13
Col16a1Q8BLX7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC34,61■■■■□ 3,13
Col16a1Q8BLX7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC34,6■■■■□ 3,13
Col16a1Q8BLX7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC34,6■■■■□ 3,13
Col16a1Q8BLX7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC34,57■■■■□ 3,13
Col16a1Q8BLX7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC34,56■■■■□ 3,12
Col16a1Q8BLX7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC34,52■■■■□ 3,12
Col16a1Q8BLX7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC34,52■■■■□ 3,12
Col16a1Q8BLX7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC34,52■■■■□ 3,12
Col16a1Q8BLX7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Col16a1Q8BLX7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Col16a1Q8BLX7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC34,44■■■■□ 3,1
Col16a1Q8BLX7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC34,44■■■■□ 3,1
Col16a1Q8BLX7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC34,42■■■■□ 3,1
Col16a1Q8BLX7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC34,42■■■■□ 3,1
Col16a1Q8BLX7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC34,42■■■■□ 3,1
Col16a1Q8BLX7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC34,4■■■■□ 3,1
Col16a1Q8BLX7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC34,4■■■■□ 3,1
Col16a1Q8BLX7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Col16a1Q8BLX7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Col16a1Q8BLX7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC34,38■■■■□ 3,09
Col16a1Q8BLX7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC34,37■■■■□ 3,09
Col16a1Q8BLX7 Gm42809-201ENSMUST00000198429 1138 ntBASIC34,37■■■■□ 3,09
Col16a1Q8BLX7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC34,36■■■■□ 3,09
Col16a1Q8BLX7 AC157572.2-201ENSMUST00000226970 908 ntBASIC34,36■■■■□ 3,09
Col16a1Q8BLX7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC34,36■■■■□ 3,09
Col16a1Q8BLX7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC34,36■■■■□ 3,09
Col16a1Q8BLX7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC34,35■■■■□ 3,09
Col16a1Q8BLX7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC34,34■■■■□ 3,09
Col16a1Q8BLX7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Col16a1Q8BLX7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC34,31■■■■□ 3,08
Col16a1Q8BLX7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC34,31■■■■□ 3,08
Col16a1Q8BLX7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC34,31■■■■□ 3,08
Col16a1Q8BLX7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC34,3■■■■□ 3,08
Col16a1Q8BLX7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC34,3■■■■□ 3,08
Col16a1Q8BLX7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC34,3■■■■□ 3,08
Col16a1Q8BLX7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34,27■■■■□ 3,08
Col16a1Q8BLX7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC34,26■■■■□ 3,08
Col16a1Q8BLX7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC34,25■■■■□ 3,07
Col16a1Q8BLX7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC34,25■■■■□ 3,07
Col16a1Q8BLX7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC34,25■■■■□ 3,07
Col16a1Q8BLX7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC34,25■■■■□ 3,07
Col16a1Q8BLX7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC34,24■■■■□ 3,07
Col16a1Q8BLX7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC34,24■■■■□ 3,07
Col16a1Q8BLX7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC34,24■■■■□ 3,07
Col16a1Q8BLX7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC34,2■■■■□ 3,07
Col16a1Q8BLX7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC34,2■■■■□ 3,06
Col16a1Q8BLX7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC34,19■■■■□ 3,06
Col16a1Q8BLX7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC34,19■■■■□ 3,06
Col16a1Q8BLX7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC34,17■■■■□ 3,06
Col16a1Q8BLX7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC34,16■■■■□ 3,06
Col16a1Q8BLX7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC34,16■■■■□ 3,06
Col16a1Q8BLX7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC34,15■■■■□ 3,06
Col16a1Q8BLX7 Gm30346-201ENSMUST00000218641 1699 ntBASIC34,11■■■■□ 3,05
Col16a1Q8BLX7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC34,1■■■■□ 3,05
Col16a1Q8BLX7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC34,1■■■■□ 3,05
Col16a1Q8BLX7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC34,1■■■■□ 3,05
Col16a1Q8BLX7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC34,09■■■■□ 3,05
Col16a1Q8BLX7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34,09■■■■□ 3,05
Retrieved 100 of 76,532 protein–RNA pairs in 42,6 ms