Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl3Q8BLF2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl3Q8BLF2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl3Q8BLF2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl3Q8BLF2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl3Q8BLF2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl3Q8BLF2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.6■■□□□ 1.05
Cdkl3Q8BLF2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl3Q8BLF2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl3Q8BLF2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl3Q8BLF2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl3Q8BLF2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdkl3Q8BLF2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cdkl3Q8BLF2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl3Q8BLF2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl3Q8BLF2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkl3Q8BLF2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdkl3Q8BLF2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.55■■□□□ 1.04
Cdkl3Q8BLF2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdkl3Q8BLF2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cdkl3Q8BLF2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.52■■□□□ 1.03
Cdkl3Q8BLF2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdkl3Q8BLF2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl3Q8BLF2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cdkl3Q8BLF2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl3Q8BLF2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdkl3Q8BLF2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Cdkl3Q8BLF2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdkl3Q8BLF2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl3Q8BLF2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkl3Q8BLF2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdkl3Q8BLF2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cdkl3Q8BLF2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkl3Q8BLF2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl3Q8BLF2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl3Q8BLF2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkl3Q8BLF2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.42■■□□□ 1.02
Cdkl3Q8BLF2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdkl3Q8BLF2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl3Q8BLF2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkl3Q8BLF2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cdkl3Q8BLF2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkl3Q8BLF2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdkl3Q8BLF2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkl3Q8BLF2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.39■■□□□ 1.01
Cdkl3Q8BLF2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl3Q8BLF2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.37■■□□□ 1.01
Cdkl3Q8BLF2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdkl3Q8BLF2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Cdkl3Q8BLF2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl3Q8BLF2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkl3Q8BLF2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkl3Q8BLF2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkl3Q8BLF2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cdkl3Q8BLF2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.31■■□□□ 1
Cdkl3Q8BLF2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.31■■□□□ 1
Cdkl3Q8BLF2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl3Q8BLF2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl3Q8BLF2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl3Q8BLF2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl3Q8BLF2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdkl3Q8BLF2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.28■■□□□ 1
Cdkl3Q8BLF2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cdkl3Q8BLF2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdkl3Q8BLF2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.27■□□□□ 0.99
Cdkl3Q8BLF2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl3Q8BLF2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl3Q8BLF2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl3Q8BLF2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl3Q8BLF2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cdkl3Q8BLF2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl3Q8BLF2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl3Q8BLF2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cdkl3Q8BLF2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl3Q8BLF2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkl3Q8BLF2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl3Q8BLF2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl3Q8BLF2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdkl3Q8BLF2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdkl3Q8BLF2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.22■□□□□ 0.99
Cdkl3Q8BLF2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl3Q8BLF2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkl3Q8BLF2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cdkl3Q8BLF2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl3Q8BLF2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl3Q8BLF2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl3Q8BLF2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdkl3Q8BLF2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdkl3Q8BLF2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdkl3Q8BLF2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cdkl3Q8BLF2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl3Q8BLF2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdkl3Q8BLF2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkl3Q8BLF2 Rab21-202ENSMUST00000218831 843 ntBASIC21.17■□□□□ 0.98
Cdkl3Q8BLF2 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.17■□□□□ 0.98
Cdkl3Q8BLF2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl3Q8BLF2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl3Q8BLF2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkl3Q8BLF2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdkl3Q8BLF2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms