Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smg1Q8BKX6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Smg1Q8BKX6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.32■■□□□ 1.16
Smg1Q8BKX6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
Smg1Q8BKX6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smg1Q8BKX6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.3■■□□□ 1.16
Smg1Q8BKX6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smg1Q8BKX6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Smg1Q8BKX6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Smg1Q8BKX6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Smg1Q8BKX6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.27■■□□□ 1.16
Smg1Q8BKX6 Mipep-204ENSMUST00000225043 1548 ntBASIC22.26■■□□□ 1.15
Smg1Q8BKX6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.25■■□□□ 1.15
Smg1Q8BKX6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Smg1Q8BKX6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Smg1Q8BKX6 Gm7432-201ENSMUST00000210343 879 ntBASIC22.22■■□□□ 1.15
Smg1Q8BKX6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smg1Q8BKX6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smg1Q8BKX6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smg1Q8BKX6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smg1Q8BKX6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smg1Q8BKX6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smg1Q8BKX6 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.17■■□□□ 1.14
Smg1Q8BKX6 Gm11175-201ENSMUST00000116172 543 ntBASIC22.16■■□□□ 1.14
Smg1Q8BKX6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Smg1Q8BKX6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Smg1Q8BKX6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Smg1Q8BKX6 Cap2-205ENSMUST00000225824 1634 ntBASIC22.12■■□□□ 1.13
Smg1Q8BKX6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
Smg1Q8BKX6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smg1Q8BKX6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smg1Q8BKX6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Smg1Q8BKX6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Smg1Q8BKX6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Smg1Q8BKX6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.07■■□□□ 1.12
Smg1Q8BKX6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Smg1Q8BKX6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Smg1Q8BKX6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smg1Q8BKX6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Gm15039-201ENSMUST00000118914 875 ntBASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smg1Q8BKX6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Smg1Q8BKX6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Smg1Q8BKX6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.02■■□□□ 1.12
Smg1Q8BKX6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.02■■□□□ 1.12
Smg1Q8BKX6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Smg1Q8BKX6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smg1Q8BKX6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Smg1Q8BKX6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22■■□□□ 1.11
Smg1Q8BKX6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smg1Q8BKX6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smg1Q8BKX6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smg1Q8BKX6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.97■■□□□ 1.11
Smg1Q8BKX6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smg1Q8BKX6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smg1Q8BKX6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smg1Q8BKX6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smg1Q8BKX6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smg1Q8BKX6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gm11599-201ENSMUST00000118720 878 ntBASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Smg1Q8BKX6 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.92■■□□□ 1.1
Smg1Q8BKX6 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.91■■□□□ 1.1
Smg1Q8BKX6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smg1Q8BKX6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smg1Q8BKX6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smg1Q8BKX6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smg1Q8BKX6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smg1Q8BKX6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smg1Q8BKX6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smg1Q8BKX6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Smg1Q8BKX6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smg1Q8BKX6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smg1Q8BKX6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smg1Q8BKX6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smg1Q8BKX6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smg1Q8BKX6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smg1Q8BKX6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smg1Q8BKX6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Smg1Q8BKX6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smg1Q8BKX6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smg1Q8BKX6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Smg1Q8BKX6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smg1Q8BKX6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.8■■□□□ 1.08
Smg1Q8BKX6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smg1Q8BKX6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smg1Q8BKX6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms