Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.4■■■□□ 2.46
Scn10aQ6QIY3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Scn10aQ6QIY3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Scn10aQ6QIY3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.39■■■□□ 2.46
Scn10aQ6QIY3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.34■■■□□ 2.45
Scn10aQ6QIY3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Scn10aQ6QIY3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Scn10aQ6QIY3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.32■■■□□ 2.44
Scn10aQ6QIY3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Scn10aQ6QIY3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scn10aQ6QIY3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Scn10aQ6QIY3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.29■■■□□ 2.44
Scn10aQ6QIY3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Scn10aQ6QIY3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Scn10aQ6QIY3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Scn10aQ6QIY3 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.25■■■□□ 2.43
Scn10aQ6QIY3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Scn10aQ6QIY3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Scn10aQ6QIY3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.22■■■□□ 2.43
Scn10aQ6QIY3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
Scn10aQ6QIY3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Scn10aQ6QIY3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Scn10aQ6QIY3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Scn10aQ6QIY3 Gm6821-201ENSMUST00000107540 542 ntBASIC30.18■■■□□ 2.42
Scn10aQ6QIY3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Scn10aQ6QIY3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Scn10aQ6QIY3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Scn10aQ6QIY3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Scn10aQ6QIY3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Scn10aQ6QIY3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.41
Scn10aQ6QIY3 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.13■■■□□ 2.41
Scn10aQ6QIY3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Scn10aQ6QIY3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Scn10aQ6QIY3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Scn10aQ6QIY3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
Scn10aQ6QIY3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Scn10aQ6QIY3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Scn10aQ6QIY3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.07■■■□□ 2.4
Scn10aQ6QIY3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Scn10aQ6QIY3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
Scn10aQ6QIY3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Scn10aQ6QIY3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Scn10aQ6QIY3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.03■■■□□ 2.4
Scn10aQ6QIY3 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.03■■■□□ 2.4
Scn10aQ6QIY3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Scn10aQ6QIY3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.02■■■□□ 2.4
Scn10aQ6QIY3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Scn10aQ6QIY3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Scn10aQ6QIY3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Scn10aQ6QIY3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Scn10aQ6QIY3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Scn10aQ6QIY3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Scn10aQ6QIY3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Scn10aQ6QIY3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Scn10aQ6QIY3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.96■■■□□ 2.39
Scn10aQ6QIY3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Scn10aQ6QIY3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Scn10aQ6QIY3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Scn10aQ6QIY3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Scn10aQ6QIY3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Scn10aQ6QIY3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Scn10aQ6QIY3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.87■■■□□ 2.37
Scn10aQ6QIY3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Scn10aQ6QIY3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Scn10aQ6QIY3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Scn10aQ6QIY3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Scn10aQ6QIY3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
Scn10aQ6QIY3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Scn10aQ6QIY3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Scn10aQ6QIY3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Scn10aQ6QIY3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.81■■■□□ 2.36
Scn10aQ6QIY3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Scn10aQ6QIY3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Scn10aQ6QIY3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Scn10aQ6QIY3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Scn10aQ6QIY3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Scn10aQ6QIY3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.73■■■□□ 2.35
Scn10aQ6QIY3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Scn10aQ6QIY3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.73■■■□□ 2.35
Scn10aQ6QIY3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.71■■■□□ 2.35
Scn10aQ6QIY3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
Scn10aQ6QIY3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Scn10aQ6QIY3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Scn10aQ6QIY3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Scn10aQ6QIY3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Scn10aQ6QIY3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.67■■■□□ 2.34
Scn10aQ6QIY3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Scn10aQ6QIY3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.65■■■□□ 2.34
Scn10aQ6QIY3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Scn10aQ6QIY3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Scn10aQ6QIY3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Scn10aQ6QIY3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.63■■■□□ 2.33
Scn10aQ6QIY3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Scn10aQ6QIY3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.63■■■□□ 2.33
Scn10aQ6QIY3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
Scn10aQ6QIY3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.62■■■□□ 2.33
Scn10aQ6QIY3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Scn10aQ6QIY3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
Scn10aQ6QIY3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Scn10aQ6QIY3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.59■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms