Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cachd1Q6PDJ1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cachd1Q6PDJ1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.29■■□□□ 1.8
Cachd1Q6PDJ1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cachd1Q6PDJ1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.27■■□□□ 1.8
Cachd1Q6PDJ1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cachd1Q6PDJ1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.24■■□□□ 1.79
Cachd1Q6PDJ1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cachd1Q6PDJ1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Cachd1Q6PDJ1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.21■■□□□ 1.79
Cachd1Q6PDJ1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cachd1Q6PDJ1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Cachd1Q6PDJ1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cachd1Q6PDJ1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cachd1Q6PDJ1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Cachd1Q6PDJ1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Cachd1Q6PDJ1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cachd1Q6PDJ1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cachd1Q6PDJ1 Gm11599-201ENSMUST00000118720 878 ntBASIC26.13■■□□□ 1.77
Cachd1Q6PDJ1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.13■■□□□ 1.77
Cachd1Q6PDJ1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cachd1Q6PDJ1 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.12■■□□□ 1.77
Cachd1Q6PDJ1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cachd1Q6PDJ1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Cachd1Q6PDJ1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.06■■□□□ 1.76
Cachd1Q6PDJ1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Cachd1Q6PDJ1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Cachd1Q6PDJ1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cachd1Q6PDJ1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.02■■□□□ 1.76
Cachd1Q6PDJ1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.02■■□□□ 1.76
Cachd1Q6PDJ1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Cachd1Q6PDJ1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.01■■□□□ 1.75
Cachd1Q6PDJ1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.99■■□□□ 1.75
Cachd1Q6PDJ1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.98■■□□□ 1.75
Cachd1Q6PDJ1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cachd1Q6PDJ1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Cachd1Q6PDJ1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Cachd1Q6PDJ1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Cachd1Q6PDJ1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cachd1Q6PDJ1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cachd1Q6PDJ1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.94■■□□□ 1.74
Cachd1Q6PDJ1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cachd1Q6PDJ1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cachd1Q6PDJ1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cachd1Q6PDJ1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Cachd1Q6PDJ1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Cachd1Q6PDJ1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cachd1Q6PDJ1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cachd1Q6PDJ1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Cachd1Q6PDJ1 Gm22567-201ENSMUST00000175542 342 ntBASIC25.9■■□□□ 1.74
Cachd1Q6PDJ1 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.9■■□□□ 1.74
Cachd1Q6PDJ1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.89■■□□□ 1.74
Cachd1Q6PDJ1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.88■■□□□ 1.73
Cachd1Q6PDJ1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Cachd1Q6PDJ1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cachd1Q6PDJ1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cachd1Q6PDJ1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Cachd1Q6PDJ1 Nkain2-201ENSMUST00000092602 558 ntBASIC25.86■■□□□ 1.73
Cachd1Q6PDJ1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cachd1Q6PDJ1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.81■■□□□ 1.72
Cachd1Q6PDJ1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cachd1Q6PDJ1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Cachd1Q6PDJ1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Cachd1Q6PDJ1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Cachd1Q6PDJ1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.79■■□□□ 1.72
Cachd1Q6PDJ1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Cachd1Q6PDJ1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cachd1Q6PDJ1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cachd1Q6PDJ1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Cachd1Q6PDJ1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cachd1Q6PDJ1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cachd1Q6PDJ1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cachd1Q6PDJ1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Cachd1Q6PDJ1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Cachd1Q6PDJ1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cachd1Q6PDJ1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.74■■□□□ 1.71
Cachd1Q6PDJ1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cachd1Q6PDJ1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Cachd1Q6PDJ1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.72■■□□□ 1.71
Cachd1Q6PDJ1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.72■■□□□ 1.71
Cachd1Q6PDJ1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cachd1Q6PDJ1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Cachd1Q6PDJ1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Cachd1Q6PDJ1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Cachd1Q6PDJ1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Cachd1Q6PDJ1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cachd1Q6PDJ1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Cachd1Q6PDJ1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cachd1Q6PDJ1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cachd1Q6PDJ1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cachd1Q6PDJ1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cachd1Q6PDJ1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Cachd1Q6PDJ1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cachd1Q6PDJ1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cachd1Q6PDJ1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cachd1Q6PDJ1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cachd1Q6PDJ1 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.59■■□□□ 1.69
Cachd1Q6PDJ1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cachd1Q6PDJ1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Cachd1Q6PDJ1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms