Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ltn1Q6A009 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Ltn1Q6A009 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ltn1Q6A009 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ltn1Q6A009 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
Ltn1Q6A009 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Ltn1Q6A009 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ltn1Q6A009 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ltn1Q6A009 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ltn1Q6A009 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.36■■■□□ 2.61
Ltn1Q6A009 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.35■■■□□ 2.61
Ltn1Q6A009 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.35■■■□□ 2.61
Ltn1Q6A009 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ltn1Q6A009 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Ltn1Q6A009 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.33■■■□□ 2.61
Ltn1Q6A009 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Ltn1Q6A009 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ltn1Q6A009 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ltn1Q6A009 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.31■■■□□ 2.6
Ltn1Q6A009 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Ltn1Q6A009 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.3■■■□□ 2.6
Ltn1Q6A009 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ltn1Q6A009 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ltn1Q6A009 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ltn1Q6A009 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ltn1Q6A009 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.29■■■□□ 2.6
Ltn1Q6A009 Gm8503-201ENSMUST00000118131 455 ntBASIC31.28■■■□□ 2.6
Ltn1Q6A009 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Ltn1Q6A009 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.27■■■□□ 2.6
Ltn1Q6A009 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ltn1Q6A009 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.24■■■□□ 2.59
Ltn1Q6A009 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.24■■■□□ 2.59
Ltn1Q6A009 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ltn1Q6A009 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ltn1Q6A009 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
Ltn1Q6A009 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ltn1Q6A009 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ltn1Q6A009 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ltn1Q6A009 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ltn1Q6A009 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ltn1Q6A009 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.15■■■□□ 2.58
Ltn1Q6A009 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ltn1Q6A009 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Ltn1Q6A009 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ltn1Q6A009 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.1■■■□□ 2.57
Ltn1Q6A009 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Ltn1Q6A009 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ltn1Q6A009 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ltn1Q6A009 Gm6821-201ENSMUST00000107540 542 ntBASIC31.07■■■□□ 2.56
Ltn1Q6A009 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ltn1Q6A009 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ltn1Q6A009 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Ltn1Q6A009 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ltn1Q6A009 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
Ltn1Q6A009 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Ltn1Q6A009 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Ltn1Q6A009 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Ltn1Q6A009 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ltn1Q6A009 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ltn1Q6A009 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31■■■□□ 2.55
Ltn1Q6A009 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
Ltn1Q6A009 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.99■■■□□ 2.55
Ltn1Q6A009 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
Ltn1Q6A009 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
Ltn1Q6A009 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ltn1Q6A009 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ltn1Q6A009 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Ltn1Q6A009 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.94■■■□□ 2.54
Ltn1Q6A009 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ltn1Q6A009 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ltn1Q6A009 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ltn1Q6A009 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Ltn1Q6A009 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.92■■■□□ 2.54
Ltn1Q6A009 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
Ltn1Q6A009 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ltn1Q6A009 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.9■■■□□ 2.54
Ltn1Q6A009 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Ltn1Q6A009 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ltn1Q6A009 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
Ltn1Q6A009 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Ltn1Q6A009 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ltn1Q6A009 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ltn1Q6A009 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ltn1Q6A009 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ltn1Q6A009 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ltn1Q6A009 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.81■■■□□ 2.52
Ltn1Q6A009 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ltn1Q6A009 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ltn1Q6A009 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
Ltn1Q6A009 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ltn1Q6A009 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Ltn1Q6A009 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ltn1Q6A009 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ltn1Q6A009 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ltn1Q6A009 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ltn1Q6A009 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ltn1Q6A009 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.72■■■□□ 2.51
Ltn1Q6A009 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ltn1Q6A009 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ltn1Q6A009 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms