Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufa4Q62425 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufa4Q62425 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ndufa4Q62425 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ndufa4Q62425 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.21■□□□□ 0.51
Ndufa4Q62425 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.2■□□□□ 0.5
Ndufa4Q62425 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ndufa4Q62425 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndufa4Q62425 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndufa4Q62425 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndufa4Q62425 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ndufa4Q62425 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufa4Q62425 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa4Q62425 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa4Q62425 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa4Q62425 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufa4Q62425 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.16■□□□□ 0.5
Ndufa4Q62425 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa4Q62425 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa4Q62425 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufa4Q62425 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufa4Q62425 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa4Q62425 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa4Q62425 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufa4Q62425 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufa4Q62425 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufa4Q62425 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufa4Q62425 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa4Q62425 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa4Q62425 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa4Q62425 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufa4Q62425 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.09■□□□□ 0.49
Ndufa4Q62425 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ndufa4Q62425 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.08■□□□□ 0.48
Ndufa4Q62425 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ndufa4Q62425 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufa4Q62425 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufa4Q62425 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufa4Q62425 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ndufa4Q62425 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufa4Q62425 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufa4Q62425 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufa4Q62425 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufa4Q62425 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ndufa4Q62425 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufa4Q62425 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufa4Q62425 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndufa4Q62425 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndufa4Q62425 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ndufa4Q62425 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ndufa4Q62425 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ndufa4Q62425 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufa4Q62425 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.03■□□□□ 0.48
Ndufa4Q62425 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufa4Q62425 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufa4Q62425 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufa4Q62425 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufa4Q62425 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufa4Q62425 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufa4Q62425 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufa4Q62425 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufa4Q62425 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufa4Q62425 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufa4Q62425 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufa4Q62425 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufa4Q62425 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufa4Q62425 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ndufa4Q62425 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.99■□□□□ 0.47
Ndufa4Q62425 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufa4Q62425 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufa4Q62425 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufa4Q62425 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufa4Q62425 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufa4Q62425 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
Ndufa4Q62425 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufa4Q62425 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufa4Q62425 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufa4Q62425 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa4Q62425 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa4Q62425 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa4Q62425 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa4Q62425 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufa4Q62425 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufa4Q62425 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufa4Q62425 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Ndufa4Q62425 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ndufa4Q62425 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Ndufa4Q62425 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.91■□□□□ 0.46
Ndufa4Q62425 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufa4Q62425 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufa4Q62425 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufa4Q62425 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ndufa4Q62425 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufa4Q62425 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ndufa4Q62425 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.88■□□□□ 0.45
Ndufa4Q62425 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.88■□□□□ 0.45
Ndufa4Q62425 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufa4Q62425 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Ndufa4Q62425 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufa4Q62425 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms