Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Scn9aQ62205 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.35■■■□□ 2.61
Scn9aQ62205 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Scn9aQ62205 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Scn9aQ62205 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.32■■■□□ 2.6
Scn9aQ62205 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scn9aQ62205 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Scn9aQ62205 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Scn9aQ62205 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Scn9aQ62205 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Scn9aQ62205 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Scn9aQ62205 Gm6821-201ENSMUST00000107540 542 ntBASIC31.25■■■□□ 2.59
Scn9aQ62205 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Scn9aQ62205 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Scn9aQ62205 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
Scn9aQ62205 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Scn9aQ62205 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Scn9aQ62205 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Scn9aQ62205 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
Scn9aQ62205 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Scn9aQ62205 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Scn9aQ62205 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.16■■■□□ 2.58
Scn9aQ62205 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Scn9aQ62205 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
Scn9aQ62205 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.13■■■□□ 2.57
Scn9aQ62205 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Scn9aQ62205 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Scn9aQ62205 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.12■■■□□ 2.57
Scn9aQ62205 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Scn9aQ62205 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Scn9aQ62205 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Scn9aQ62205 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scn9aQ62205 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scn9aQ62205 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Scn9aQ62205 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Scn9aQ62205 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
Scn9aQ62205 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Scn9aQ62205 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Scn9aQ62205 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Scn9aQ62205 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.02■■■□□ 2.56
Scn9aQ62205 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Scn9aQ62205 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Scn9aQ62205 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
Scn9aQ62205 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.97■■■□□ 2.55
Scn9aQ62205 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Scn9aQ62205 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Scn9aQ62205 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.96■■■□□ 2.55
Scn9aQ62205 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Scn9aQ62205 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Scn9aQ62205 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Scn9aQ62205 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Scn9aQ62205 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.92■■■□□ 2.54
Scn9aQ62205 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.91■■■□□ 2.54
Scn9aQ62205 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scn9aQ62205 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scn9aQ62205 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Scn9aQ62205 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
Scn9aQ62205 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Scn9aQ62205 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Scn9aQ62205 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Scn9aQ62205 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.82■■■□□ 2.53
Scn9aQ62205 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Scn9aQ62205 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Scn9aQ62205 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
Scn9aQ62205 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.77■■■□□ 2.52
Scn9aQ62205 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.75■■■□□ 2.51
Scn9aQ62205 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Scn9aQ62205 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Scn9aQ62205 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.74■■■□□ 2.51
Scn9aQ62205 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Scn9aQ62205 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Scn9aQ62205 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Scn9aQ62205 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Scn9aQ62205 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Scn9aQ62205 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.67■■■□□ 2.5
Scn9aQ62205 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Scn9aQ62205 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Scn9aQ62205 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.65■■■□□ 2.5
Scn9aQ62205 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Scn9aQ62205 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.63■■■□□ 2.49
Scn9aQ62205 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Scn9aQ62205 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Scn9aQ62205 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Scn9aQ62205 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.61■■■□□ 2.49
Scn9aQ62205 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Scn9aQ62205 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Scn9aQ62205 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Scn9aQ62205 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Scn9aQ62205 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Scn9aQ62205 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Scn9aQ62205 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Scn9aQ62205 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Scn9aQ62205 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Scn9aQ62205 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Scn9aQ62205 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Scn9aQ62205 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Scn9aQ62205 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Scn9aQ62205 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.55■■■□□ 2.48
Scn9aQ62205 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Scn9aQ62205 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms