Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Arhgef40Q3UPH7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.86
Arhgef40Q3UPH7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC39.13■■■■□ 3.86
Arhgef40Q3UPH7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
Arhgef40Q3UPH7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC39.1■■■■□ 3.85
Arhgef40Q3UPH7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC39.09■■■■□ 3.85
Arhgef40Q3UPH7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC39.09■■■■□ 3.85
Arhgef40Q3UPH7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Arhgef40Q3UPH7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC39.09■■■■□ 3.85
Arhgef40Q3UPH7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Arhgef40Q3UPH7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Arhgef40Q3UPH7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Arhgef40Q3UPH7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Arhgef40Q3UPH7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC39.03■■■■□ 3.84
Arhgef40Q3UPH7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC39.03■■■■□ 3.84
Arhgef40Q3UPH7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Arhgef40Q3UPH7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
Arhgef40Q3UPH7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
Arhgef40Q3UPH7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC38.97■■■■□ 3.83
Arhgef40Q3UPH7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Arhgef40Q3UPH7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Arhgef40Q3UPH7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC38.93■■■■□ 3.82
Arhgef40Q3UPH7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC38.92■■■■□ 3.82
Arhgef40Q3UPH7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Arhgef40Q3UPH7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC38.87■■■■□ 3.81
Arhgef40Q3UPH7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Arhgef40Q3UPH7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Arhgef40Q3UPH7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC38.82■■■■□ 3.81
Arhgef40Q3UPH7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC38.81■■■■□ 3.8
Arhgef40Q3UPH7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Arhgef40Q3UPH7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Arhgef40Q3UPH7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
Arhgef40Q3UPH7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
Arhgef40Q3UPH7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC38.71■■■■□ 3.79
Arhgef40Q3UPH7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Arhgef40Q3UPH7 Gm43863-201ENSMUST00000203822 1192 ntBASIC38.69■■■■□ 3.78
Arhgef40Q3UPH7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Arhgef40Q3UPH7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC38.68■■■■□ 3.78
Arhgef40Q3UPH7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC38.67■■■■□ 3.78
Arhgef40Q3UPH7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC38.66■■■■□ 3.78
Arhgef40Q3UPH7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC38.65■■■■□ 3.78
Arhgef40Q3UPH7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
Arhgef40Q3UPH7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Arhgef40Q3UPH7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Arhgef40Q3UPH7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC38.59■■■■□ 3.77
Arhgef40Q3UPH7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
Arhgef40Q3UPH7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC38.58■■■■□ 3.77
Arhgef40Q3UPH7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC38.58■■■■□ 3.77
Arhgef40Q3UPH7 Gm8503-201ENSMUST00000118131 455 ntBASIC38.57■■■■□ 3.76
Arhgef40Q3UPH7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC38.57■■■■□ 3.76
Arhgef40Q3UPH7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Arhgef40Q3UPH7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC38.56■■■■□ 3.76
Arhgef40Q3UPH7 Gm9939-201ENSMUST00000067161 1154 ntBASIC38.56■■■■□ 3.76
Arhgef40Q3UPH7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC38.55■■■■□ 3.76
Arhgef40Q3UPH7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Arhgef40Q3UPH7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC38.53■■■■□ 3.76
Arhgef40Q3UPH7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
Arhgef40Q3UPH7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC38.53■■■■□ 3.76
Arhgef40Q3UPH7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
Arhgef40Q3UPH7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
Arhgef40Q3UPH7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC38.52■■■■□ 3.76
Arhgef40Q3UPH7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC38.52■■■■□ 3.76
Arhgef40Q3UPH7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
Arhgef40Q3UPH7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC38.51■■■■□ 3.76
Arhgef40Q3UPH7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
Arhgef40Q3UPH7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Arhgef40Q3UPH7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC38.48■■■■□ 3.75
Arhgef40Q3UPH7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC38.46■■■■□ 3.75
Arhgef40Q3UPH7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Arhgef40Q3UPH7 AC157572.2-201ENSMUST00000226970 908 ntBASIC38.45■■■■□ 3.75
Arhgef40Q3UPH7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
Arhgef40Q3UPH7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
Arhgef40Q3UPH7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
Arhgef40Q3UPH7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC38.42■■■■□ 3.74
Arhgef40Q3UPH7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Arhgef40Q3UPH7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Arhgef40Q3UPH7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
Arhgef40Q3UPH7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC38.38■■■■□ 3.74
Arhgef40Q3UPH7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC38.37■■■■□ 3.73
Arhgef40Q3UPH7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC38.35■■■■□ 3.73
Arhgef40Q3UPH7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Arhgef40Q3UPH7 Gm30346-201ENSMUST00000218641 1699 ntBASIC38.32■■■■□ 3.73
Arhgef40Q3UPH7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
Arhgef40Q3UPH7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Arhgef40Q3UPH7 Gm6821-201ENSMUST00000107540 542 ntBASIC38.28■■■■□ 3.72
Arhgef40Q3UPH7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Arhgef40Q3UPH7 Gm2415-204ENSMUST00000190235 2004 ntBASIC38.28■■■■□ 3.72
Arhgef40Q3UPH7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC38.27■■■■□ 3.72
Arhgef40Q3UPH7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Arhgef40Q3UPH7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC38.25■■■■□ 3.71
Arhgef40Q3UPH7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Arhgef40Q3UPH7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Arhgef40Q3UPH7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Arhgef40Q3UPH7 Gm42809-201ENSMUST00000198429 1138 ntBASIC38.2■■■■□ 3.71
Arhgef40Q3UPH7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC38.2■■■■□ 3.71
Arhgef40Q3UPH7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC38.2■■■■□ 3.7
Arhgef40Q3UPH7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC38.19■■■■□ 3.7
Arhgef40Q3UPH7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC38.19■■■■□ 3.7
Arhgef40Q3UPH7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
Arhgef40Q3UPH7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms