Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Uspl1Q3ULM6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Uspl1Q3ULM6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.52■■■□□ 2.96
Uspl1Q3ULM6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Uspl1Q3ULM6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Uspl1Q3ULM6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Uspl1Q3ULM6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
Uspl1Q3ULM6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Uspl1Q3ULM6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
Uspl1Q3ULM6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Uspl1Q3ULM6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Uspl1Q3ULM6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Uspl1Q3ULM6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
Uspl1Q3ULM6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC33.41■■■□□ 2.94
Uspl1Q3ULM6 Gm30346-201ENSMUST00000218641 1699 ntBASIC33.41■■■□□ 2.94
Uspl1Q3ULM6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
Uspl1Q3ULM6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Uspl1Q3ULM6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Uspl1Q3ULM6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC33.35■■■□□ 2.93
Uspl1Q3ULM6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC33.35■■■□□ 2.93
Uspl1Q3ULM6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
Uspl1Q3ULM6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Uspl1Q3ULM6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC33.31■■■□□ 2.92
Uspl1Q3ULM6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Uspl1Q3ULM6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC33.3■■■□□ 2.92
Uspl1Q3ULM6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC33.29■■■□□ 2.92
Uspl1Q3ULM6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Uspl1Q3ULM6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Uspl1Q3ULM6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Uspl1Q3ULM6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Uspl1Q3ULM6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
Uspl1Q3ULM6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Uspl1Q3ULM6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Uspl1Q3ULM6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Uspl1Q3ULM6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
Uspl1Q3ULM6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Uspl1Q3ULM6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
Uspl1Q3ULM6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
Uspl1Q3ULM6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Uspl1Q3ULM6 Zfp131-205ENSMUST00000223812 663 ntBASIC33.2■■■□□ 2.91
Uspl1Q3ULM6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Uspl1Q3ULM6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
Uspl1Q3ULM6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Uspl1Q3ULM6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Uspl1Q3ULM6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Uspl1Q3ULM6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Uspl1Q3ULM6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC33.15■■■□□ 2.9
Uspl1Q3ULM6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Uspl1Q3ULM6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Uspl1Q3ULM6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Uspl1Q3ULM6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Uspl1Q3ULM6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Uspl1Q3ULM6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC33.11■■■□□ 2.89
Uspl1Q3ULM6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Uspl1Q3ULM6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Uspl1Q3ULM6 Gm6345-201ENSMUST00000180378 1691 ntBASIC33.1■■■□□ 2.89
Uspl1Q3ULM6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
Uspl1Q3ULM6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Uspl1Q3ULM6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC33.03■■■□□ 2.88
Uspl1Q3ULM6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Uspl1Q3ULM6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.01■■■□□ 2.87
Uspl1Q3ULM6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
Uspl1Q3ULM6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Uspl1Q3ULM6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Uspl1Q3ULM6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.97■■■□□ 2.87
Uspl1Q3ULM6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
Uspl1Q3ULM6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Uspl1Q3ULM6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Uspl1Q3ULM6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Uspl1Q3ULM6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Uspl1Q3ULM6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Uspl1Q3ULM6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.93■■■□□ 2.86
Uspl1Q3ULM6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Uspl1Q3ULM6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Uspl1Q3ULM6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Uspl1Q3ULM6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.91■■■□□ 2.86
Uspl1Q3ULM6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Uspl1Q3ULM6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Uspl1Q3ULM6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Uspl1Q3ULM6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Uspl1Q3ULM6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Uspl1Q3ULM6 Zxda-201ENSMUST00000117281 2621 ntBASIC32.88■■■□□ 2.85
Uspl1Q3ULM6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Uspl1Q3ULM6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Uspl1Q3ULM6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.85■■■□□ 2.85
Uspl1Q3ULM6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Uspl1Q3ULM6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
Uspl1Q3ULM6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Uspl1Q3ULM6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Uspl1Q3ULM6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.84■■■□□ 2.85
Uspl1Q3ULM6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Uspl1Q3ULM6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Uspl1Q3ULM6 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.79■■■□□ 2.84
Uspl1Q3ULM6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Uspl1Q3ULM6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Uspl1Q3ULM6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
Uspl1Q3ULM6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.77■■■□□ 2.84
Uspl1Q3ULM6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Uspl1Q3ULM6 Gm9397-201ENSMUST00000200125 605 ntBASIC32.72■■■□□ 2.83
Uspl1Q3ULM6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms