Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
Lrrk1Q3UHC2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23,95■■□□□ 1,42
Lrrk1Q3UHC2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23,95■■□□□ 1,42
Lrrk1Q3UHC2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23,95■■□□□ 1,42
Lrrk1Q3UHC2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23,93■■□□□ 1,42
Lrrk1Q3UHC2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23,93■■□□□ 1,42
Lrrk1Q3UHC2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Lrrk1Q3UHC2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23,91■■□□□ 1,42
Lrrk1Q3UHC2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23,91■■□□□ 1,42
Lrrk1Q3UHC2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23,91■■□□□ 1,42
Lrrk1Q3UHC2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23,91■■□□□ 1,42
Lrrk1Q3UHC2 Gm30346-201ENSMUST00000218641 1699 ntBASIC23,91■■□□□ 1,42
Lrrk1Q3UHC2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23,89■■□□□ 1,42
Lrrk1Q3UHC2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23,89■■□□□ 1,41
Lrrk1Q3UHC2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Lrrk1Q3UHC2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23,88■■□□□ 1,41
Lrrk1Q3UHC2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23,88■■□□□ 1,41
Lrrk1Q3UHC2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23,88■■□□□ 1,41
Lrrk1Q3UHC2 Tdp2-203ENSMUST00000223804 1136 ntBASIC23,88■■□□□ 1,41
Lrrk1Q3UHC2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Lrrk1Q3UHC2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23,87■■□□□ 1,41
Lrrk1Q3UHC2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Lrrk1Q3UHC2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Lrrk1Q3UHC2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Lrrk1Q3UHC2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Lrrk1Q3UHC2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Lrrk1Q3UHC2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Lrrk1Q3UHC2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23,84■■□□□ 1,41
Lrrk1Q3UHC2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23,83■■□□□ 1,41
Lrrk1Q3UHC2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23,81■■□□□ 1,4
Lrrk1Q3UHC2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23,81■■□□□ 1,4
Lrrk1Q3UHC2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23,8■■□□□ 1,4
Lrrk1Q3UHC2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Lrrk1Q3UHC2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23,8■■□□□ 1,4
Lrrk1Q3UHC2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Lrrk1Q3UHC2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23,8■■□□□ 1,4
Lrrk1Q3UHC2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23,79■■□□□ 1,4
Lrrk1Q3UHC2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23,79■■□□□ 1,4
Lrrk1Q3UHC2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Lrrk1Q3UHC2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23,78■■□□□ 1,4
Lrrk1Q3UHC2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Lrrk1Q3UHC2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23,77■■□□□ 1,4
Lrrk1Q3UHC2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23,77■■□□□ 1,4
Lrrk1Q3UHC2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23,77■■□□□ 1,4
Lrrk1Q3UHC2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23,75■■□□□ 1,39
Lrrk1Q3UHC2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23,74■■□□□ 1,39
Lrrk1Q3UHC2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23,74■■□□□ 1,39
Lrrk1Q3UHC2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23,74■■□□□ 1,39
Lrrk1Q3UHC2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23,73■■□□□ 1,39
Lrrk1Q3UHC2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23,71■■□□□ 1,39
Lrrk1Q3UHC2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23,71■■□□□ 1,39
Lrrk1Q3UHC2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23,69■■□□□ 1,38
Lrrk1Q3UHC2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23,68■■□□□ 1,38
Lrrk1Q3UHC2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23,68■■□□□ 1,38
Lrrk1Q3UHC2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23,68■■□□□ 1,38
Lrrk1Q3UHC2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23,67■■□□□ 1,38
Lrrk1Q3UHC2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23,67■■□□□ 1,38
Lrrk1Q3UHC2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23,66■■□□□ 1,38
Lrrk1Q3UHC2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23,66■■□□□ 1,38
Lrrk1Q3UHC2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23,65■■□□□ 1,38
Lrrk1Q3UHC2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Lrrk1Q3UHC2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23,65■■□□□ 1,38
Lrrk1Q3UHC2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Lrrk1Q3UHC2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23,64■■□□□ 1,38
Lrrk1Q3UHC2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23,64■■□□□ 1,37
Lrrk1Q3UHC2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23,64■■□□□ 1,37
Lrrk1Q3UHC2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23,63■■□□□ 1,37
Lrrk1Q3UHC2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23,63■■□□□ 1,37
Lrrk1Q3UHC2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Lrrk1Q3UHC2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23,62■■□□□ 1,37
Lrrk1Q3UHC2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Lrrk1Q3UHC2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Lrrk1Q3UHC2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Lrrk1Q3UHC2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23,61■■□□□ 1,37
Lrrk1Q3UHC2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Lrrk1Q3UHC2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23,61■■□□□ 1,37
Lrrk1Q3UHC2 Gm45855-201ENSMUST00000212546 880 ntBASIC23,6■■□□□ 1,37
Lrrk1Q3UHC2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23,6■■□□□ 1,37
Lrrk1Q3UHC2 Gm9397-201ENSMUST00000200125 605 ntBASIC23,57■■□□□ 1,36
Lrrk1Q3UHC2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Lrrk1Q3UHC2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Lrrk1Q3UHC2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23,54■■□□□ 1,36
Lrrk1Q3UHC2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Lrrk1Q3UHC2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23,54■■□□□ 1,36
Lrrk1Q3UHC2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23,52■■□□□ 1,36
Lrrk1Q3UHC2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Lrrk1Q3UHC2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23,51■■□□□ 1,35
Lrrk1Q3UHC2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23,51■■□□□ 1,35
Lrrk1Q3UHC2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Lrrk1Q3UHC2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23,51■■□□□ 1,35
Lrrk1Q3UHC2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23,5■■□□□ 1,35
Lrrk1Q3UHC2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23,5■■□□□ 1,35
Lrrk1Q3UHC2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23,49■■□□□ 1,35
Lrrk1Q3UHC2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23,49■■□□□ 1,35
Lrrk1Q3UHC2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23,49■■□□□ 1,35
Lrrk1Q3UHC2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23,48■■□□□ 1,35
Lrrk1Q3UHC2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23,47■■□□□ 1,35
Lrrk1Q3UHC2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23,47■■□□□ 1,35
Lrrk1Q3UHC2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Lrrk1Q3UHC2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Retrieved 100 of 76,532 protein–RNA pairs in 28,3 ms