Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Nkx2-3P97334 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Nkx2-3P97334 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Nkx2-3P97334 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC33.26■■■□□ 2.91
Nkx2-3P97334 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33.24■■■□□ 2.91
Nkx2-3P97334 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC33.24■■■□□ 2.91
Nkx2-3P97334 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Nkx2-3P97334 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Nkx2-3P97334 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC33.21■■■□□ 2.91
Nkx2-3P97334 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC33.21■■■□□ 2.91
Nkx2-3P97334 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Nkx2-3P97334 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Nkx2-3P97334 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Nkx2-3P97334 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Nkx2-3P97334 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Nkx2-3P97334 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Nkx2-3P97334 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Nkx2-3P97334 Gm24970-201ENSMUST00000175582 82 ntBASIC33.15■■■□□ 2.9
Nkx2-3P97334 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC33.13■■■□□ 2.89
Nkx2-3P97334 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC33.12■■■□□ 2.89
Nkx2-3P97334 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Nkx2-3P97334 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Nkx2-3P97334 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Nkx2-3P97334 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Nkx2-3P97334 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Nkx2-3P97334 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
Nkx2-3P97334 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Nkx2-3P97334 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Nkx2-3P97334 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Nkx2-3P97334 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Nkx2-3P97334 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
Nkx2-3P97334 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
Nkx2-3P97334 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Nkx2-3P97334 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Nkx2-3P97334 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
Nkx2-3P97334 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Nkx2-3P97334 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Nkx2-3P97334 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Nkx2-3P97334 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Nkx2-3P97334 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.94■■■□□ 2.86
Nkx2-3P97334 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Nkx2-3P97334 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.91■■■□□ 2.86
Nkx2-3P97334 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
Nkx2-3P97334 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Nkx2-3P97334 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
Nkx2-3P97334 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Nkx2-3P97334 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.88■■■□□ 2.85
Nkx2-3P97334 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Nkx2-3P97334 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Nkx2-3P97334 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
Nkx2-3P97334 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.85■■■□□ 2.85
Nkx2-3P97334 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.84■■■□□ 2.85
Nkx2-3P97334 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Nkx2-3P97334 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Nkx2-3P97334 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.8■■■□□ 2.84
Nkx2-3P97334 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
Nkx2-3P97334 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
Nkx2-3P97334 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Nkx2-3P97334 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Nkx2-3P97334 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Nkx2-3P97334 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Nkx2-3P97334 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.74■■■□□ 2.83
Nkx2-3P97334 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Nkx2-3P97334 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
Nkx2-3P97334 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.72■■■□□ 2.83
Nkx2-3P97334 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.72■■■□□ 2.83
Nkx2-3P97334 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
Nkx2-3P97334 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Nkx2-3P97334 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Nkx2-3P97334 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.71■■■□□ 2.83
Nkx2-3P97334 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Nkx2-3P97334 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Nkx2-3P97334 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Nkx2-3P97334 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Nkx2-3P97334 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
Nkx2-3P97334 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Nkx2-3P97334 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Nkx2-3P97334 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.68■■■□□ 2.82
Nkx2-3P97334 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Nkx2-3P97334 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.65■■■□□ 2.82
Nkx2-3P97334 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Nkx2-3P97334 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
Nkx2-3P97334 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
Nkx2-3P97334 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Nkx2-3P97334 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Nkx2-3P97334 Gm8503-201ENSMUST00000118131 455 ntBASIC32.55■■■□□ 2.8
Nkx2-3P97334 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.55■■■□□ 2.8
Nkx2-3P97334 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Nkx2-3P97334 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.52■■■□□ 2.8
Nkx2-3P97334 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
Nkx2-3P97334 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Nkx2-3P97334 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.51■■■□□ 2.79
Nkx2-3P97334 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Nkx2-3P97334 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Nkx2-3P97334 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Nkx2-3P97334 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Nkx2-3P97334 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Nkx2-3P97334 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
Nkx2-3P97334 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.44■■■□□ 2.78
Nkx2-3P97334 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms