Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ybx1P62960 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ybx1P62960 Gm24970-201ENSMUST00000175582 82 ntBASIC26.53■■□□□ 1.84
Ybx1P62960 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ybx1P62960 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ybx1P62960 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ybx1P62960 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ybx1P62960 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ybx1P62960 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ybx1P62960 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ybx1P62960 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.5■■□□□ 1.83
Ybx1P62960 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.49■■□□□ 1.83
Ybx1P62960 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ybx1P62960 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ybx1P62960 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ybx1P62960 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Ybx1P62960 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ybx1P62960 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ybx1P62960 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.46■■□□□ 1.83
Ybx1P62960 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Ybx1P62960 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.44■■□□□ 1.82
Ybx1P62960 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ybx1P62960 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
Ybx1P62960 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.41■■□□□ 1.82
Ybx1P62960 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ybx1P62960 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Ybx1P62960 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ybx1P62960 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Ybx1P62960 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ybx1P62960 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.38■■□□□ 1.81
Ybx1P62960 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ybx1P62960 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ybx1P62960 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ybx1P62960 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ybx1P62960 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ybx1P62960 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
Ybx1P62960 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.3■■□□□ 1.8
Ybx1P62960 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.27■■□□□ 1.8
Ybx1P62960 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ybx1P62960 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.26■■□□□ 1.79
Ybx1P62960 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ybx1P62960 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ybx1P62960 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ybx1P62960 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ybx1P62960 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ybx1P62960 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.21■■□□□ 1.79
Ybx1P62960 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ybx1P62960 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
Ybx1P62960 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ybx1P62960 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ybx1P62960 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ybx1P62960 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ybx1P62960 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Ybx1P62960 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ybx1P62960 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ybx1P62960 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ybx1P62960 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.15■■□□□ 1.78
Ybx1P62960 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ybx1P62960 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ybx1P62960 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ybx1P62960 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ybx1P62960 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.15■■□□□ 1.78
Ybx1P62960 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ybx1P62960 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ybx1P62960 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ybx1P62960 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.13■■□□□ 1.77
Ybx1P62960 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ybx1P62960 Gm8503-201ENSMUST00000118131 455 ntBASIC26.12■■□□□ 1.77
Ybx1P62960 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ybx1P62960 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Ybx1P62960 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.11■■□□□ 1.77
Ybx1P62960 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ybx1P62960 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ybx1P62960 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ybx1P62960 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.08■■□□□ 1.77
Ybx1P62960 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ybx1P62960 Gm6821-201ENSMUST00000107540 542 ntBASIC26.07■■□□□ 1.76
Ybx1P62960 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Ybx1P62960 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ybx1P62960 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ybx1P62960 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ybx1P62960 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ybx1P62960 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Ybx1P62960 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.04■■□□□ 1.76
Ybx1P62960 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.04■■□□□ 1.76
Ybx1P62960 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ybx1P62960 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ybx1P62960 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ybx1P62960 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ybx1P62960 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ybx1P62960 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Ybx1P62960 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
Ybx1P62960 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.98■■□□□ 1.75
Ybx1P62960 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ybx1P62960 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ybx1P62960 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Ybx1P62960 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ybx1P62960 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.94■■□□□ 1.74
Ybx1P62960 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ybx1P62960 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms