Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab4aP56371 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rab4aP56371 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.78■□□□□ 0.76
Rab4aP56371 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rab4aP56371 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab4aP56371 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab4aP56371 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab4aP56371 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab4aP56371 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab4aP56371 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rab4aP56371 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab4aP56371 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.73■□□□□ 0.75
Rab4aP56371 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab4aP56371 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab4aP56371 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab4aP56371 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab4aP56371 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab4aP56371 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rab4aP56371 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab4aP56371 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab4aP56371 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.66■□□□□ 0.74
Rab4aP56371 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab4aP56371 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.64■□□□□ 0.73
Rab4aP56371 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab4aP56371 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab4aP56371 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rab4aP56371 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rab4aP56371 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rab4aP56371 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab4aP56371 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.62■□□□□ 0.73
Rab4aP56371 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
Rab4aP56371 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab4aP56371 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab4aP56371 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab4aP56371 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab4aP56371 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab4aP56371 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rab4aP56371 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab4aP56371 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab4aP56371 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rab4aP56371 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab4aP56371 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab4aP56371 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab4aP56371 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab4aP56371 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab4aP56371 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab4aP56371 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab4aP56371 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab4aP56371 Gm27325-201ENSMUST00000175467 74 ntBASIC19.53■□□□□ 0.72
Rab4aP56371 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab4aP56371 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab4aP56371 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rab4aP56371 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.51■□□□□ 0.71
Rab4aP56371 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab4aP56371 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rab4aP56371 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab4aP56371 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rab4aP56371 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab4aP56371 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.48■□□□□ 0.71
Rab4aP56371 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab4aP56371 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rab4aP56371 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab4aP56371 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab4aP56371 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab4aP56371 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab4aP56371 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab4aP56371 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab4aP56371 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab4aP56371 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab4aP56371 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab4aP56371 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab4aP56371 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab4aP56371 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab4aP56371 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rab4aP56371 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.42■□□□□ 0.7
Rab4aP56371 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Rab4aP56371 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Rab4aP56371 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab4aP56371 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab4aP56371 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab4aP56371 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab4aP56371 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab4aP56371 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab4aP56371 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab4aP56371 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab4aP56371 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.38■□□□□ 0.69
Rab4aP56371 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rab4aP56371 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab4aP56371 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab4aP56371 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab4aP56371 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab4aP56371 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.36■□□□□ 0.69
Rab4aP56371 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab4aP56371 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Rab4aP56371 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab4aP56371 Amer2-203ENSMUST00000225247 2662 ntBASIC19.34■□□□□ 0.69
Rab4aP56371 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab4aP56371 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab4aP56371 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab4aP56371 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms