Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Hmgcs2P54869 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.17■■■□□ 2.26
Hmgcs2P54869 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Hmgcs2P54869 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Hmgcs2P54869 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Hmgcs2P54869 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Hmgcs2P54869 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Hmgcs2P54869 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Hmgcs2P54869 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Hmgcs2P54869 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Hmgcs2P54869 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.12■■■□□ 2.25
Hmgcs2P54869 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Hmgcs2P54869 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.11■■■□□ 2.25
Hmgcs2P54869 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.09■■■□□ 2.25
Hmgcs2P54869 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.09■■■□□ 2.25
Hmgcs2P54869 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Hmgcs2P54869 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Hmgcs2P54869 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Hmgcs2P54869 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Hmgcs2P54869 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Hmgcs2P54869 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Hmgcs2P54869 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Hmgcs2P54869 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.99■■■□□ 2.23
Hmgcs2P54869 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgcs2P54869 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Hmgcs2P54869 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.95■■■□□ 2.22
Hmgcs2P54869 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.92■■■□□ 2.22
Hmgcs2P54869 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Hmgcs2P54869 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Hmgcs2P54869 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.9■■■□□ 2.22
Hmgcs2P54869 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Hmgcs2P54869 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Hmgcs2P54869 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Hmgcs2P54869 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Hmgcs2P54869 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Hmgcs2P54869 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Hmgcs2P54869 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Hmgcs2P54869 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.86■■■□□ 2.21
Hmgcs2P54869 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Hmgcs2P54869 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Hmgcs2P54869 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.83■■■□□ 2.21
Hmgcs2P54869 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
Hmgcs2P54869 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Hmgcs2P54869 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Hmgcs2P54869 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.8■■■□□ 2.2
Hmgcs2P54869 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Hmgcs2P54869 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Hmgcs2P54869 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.79■■■□□ 2.2
Hmgcs2P54869 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Hmgcs2P54869 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Hmgcs2P54869 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
Hmgcs2P54869 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
Hmgcs2P54869 Gm8503-201ENSMUST00000118131 455 ntBASIC28.75■■■□□ 2.19
Hmgcs2P54869 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Hmgcs2P54869 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Hmgcs2P54869 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Hmgcs2P54869 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Hmgcs2P54869 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Hmgcs2P54869 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Hmgcs2P54869 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Hmgcs2P54869 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.72■■■□□ 2.19
Hmgcs2P54869 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.72■■■□□ 2.19
Hmgcs2P54869 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Hmgcs2P54869 Gm6821-201ENSMUST00000107540 542 ntBASIC28.71■■■□□ 2.19
Hmgcs2P54869 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
Hmgcs2P54869 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.7■■■□□ 2.18
Hmgcs2P54869 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Hmgcs2P54869 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Hmgcs2P54869 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Hmgcs2P54869 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Hmgcs2P54869 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Hmgcs2P54869 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Hmgcs2P54869 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
Hmgcs2P54869 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.68■■■□□ 2.18
Hmgcs2P54869 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Hmgcs2P54869 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Hmgcs2P54869 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
Hmgcs2P54869 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Hmgcs2P54869 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Hmgcs2P54869 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Hmgcs2P54869 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Hmgcs2P54869 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
Hmgcs2P54869 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Hmgcs2P54869 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Hmgcs2P54869 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Hmgcs2P54869 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Hmgcs2P54869 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Hmgcs2P54869 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Hmgcs2P54869 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.54■■■□□ 2.16
Hmgcs2P54869 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Hmgcs2P54869 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Hmgcs2P54869 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Hmgcs2P54869 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.5■■■□□ 2.15
Hmgcs2P54869 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Hmgcs2P54869 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Hmgcs2P54869 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Hmgcs2P54869 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Hmgcs2P54869 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.46■■■□□ 2.15
Hmgcs2P54869 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.46■■■□□ 2.15
Hmgcs2P54869 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.45■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms