Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.65■■□□□ 1.06
Hmga2P52927 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmga2P52927 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Hmga2P52927 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmga2P52927 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hmga2P52927 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Hmga2P52927 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hmga2P52927 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmga2P52927 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmga2P52927 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.6■■□□□ 1.05
Hmga2P52927 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.6■■□□□ 1.05
Hmga2P52927 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hmga2P52927 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Hmga2P52927 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmga2P52927 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmga2P52927 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hmga2P52927 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmga2P52927 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmga2P52927 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmga2P52927 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.52■■□□□ 1.04
Hmga2P52927 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmga2P52927 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmga2P52927 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Hmga2P52927 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.5■■□□□ 1.03
Hmga2P52927 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmga2P52927 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hmga2P52927 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Hmga2P52927 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hmga2P52927 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmga2P52927 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmga2P52927 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmga2P52927 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmga2P52927 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmga2P52927 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.46■■□□□ 1.03
Hmga2P52927 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hmga2P52927 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmga2P52927 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hmga2P52927 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hmga2P52927 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmga2P52927 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Hmga2P52927 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hmga2P52927 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.43■■□□□ 1.02
Hmga2P52927 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmga2P52927 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Hmga2P52927 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Hmga2P52927 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmga2P52927 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.41■■□□□ 1.02
Hmga2P52927 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hmga2P52927 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmga2P52927 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.4■■□□□ 1.02
Hmga2P52927 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Hmga2P52927 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.4■■□□□ 1.02
Hmga2P52927 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmga2P52927 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmga2P52927 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
Hmga2P52927 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmga2P52927 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmga2P52927 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Hmga2P52927 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hmga2P52927 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.35■■□□□ 1.01
Hmga2P52927 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmga2P52927 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmga2P52927 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.34■■□□□ 1.01
Hmga2P52927 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hmga2P52927 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmga2P52927 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hmga2P52927 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmga2P52927 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hmga2P52927 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmga2P52927 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hmga2P52927 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Hmga2P52927 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hmga2P52927 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hmga2P52927 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hmga2P52927 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hmga2P52927 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hmga2P52927 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hmga2P52927 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hmga2P52927 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmga2P52927 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.27■■□□□ 1
Hmga2P52927 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hmga2P52927 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hmga2P52927 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmga2P52927 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hmga2P52927 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Hmga2P52927 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga2P52927 Gm25262-201ENSMUST00000174934 133 ntBASIC21.22■□□□□ 0.99
Hmga2P52927 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmga2P52927 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmga2P52927 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmga2P52927 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmga2P52927 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.21■□□□□ 0.99
Hmga2P52927 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hmga2P52927 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmga2P52927 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.19■□□□□ 0.98
Hmga2P52927 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga2P52927 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hmga2P52927 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmga2P52927 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Hmga2P52927 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms