Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srp9P49962 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srp9P49962 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srp9P49962 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Srp9P49962 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srp9P49962 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Srp9P49962 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Srp9P49962 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srp9P49962 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srp9P49962 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srp9P49962 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srp9P49962 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Srp9P49962 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srp9P49962 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srp9P49962 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srp9P49962 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Srp9P49962 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Srp9P49962 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Srp9P49962 Amer2-203ENSMUST00000225247 2662 ntBASIC21.07■□□□□ 0.96
Srp9P49962 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Srp9P49962 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Srp9P49962 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Srp9P49962 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Srp9P49962 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Srp9P49962 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srp9P49962 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srp9P49962 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srp9P49962 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srp9P49962 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srp9P49962 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srp9P49962 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21■□□□□ 0.95
Srp9P49962 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Srp9P49962 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.99■□□□□ 0.95
Srp9P49962 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Srp9P49962 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srp9P49962 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Srp9P49962 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srp9P49962 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srp9P49962 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srp9P49962 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Srp9P49962 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Srp9P49962 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srp9P49962 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srp9P49962 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srp9P49962 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.93■□□□□ 0.94
Srp9P49962 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srp9P49962 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Srp9P49962 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Srp9P49962 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Srp9P49962 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Srp9P49962 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Srp9P49962 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Srp9P49962 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Srp9P49962 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Srp9P49962 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srp9P49962 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Srp9P49962 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Srp9P49962 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srp9P49962 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Srp9P49962 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.89■□□□□ 0.93
Srp9P49962 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp9P49962 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.87■□□□□ 0.93
Srp9P49962 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srp9P49962 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Srp9P49962 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srp9P49962 Peli2-204ENSMUST00000226513 1320 ntBASIC20.85■□□□□ 0.93
Srp9P49962 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srp9P49962 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srp9P49962 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Srp9P49962 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srp9P49962 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srp9P49962 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srp9P49962 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Srp9P49962 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Srp9P49962 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srp9P49962 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.81■□□□□ 0.92
Srp9P49962 Gm24804-201ENSMUST00000174982 85 ntBASIC20.81■□□□□ 0.92
Srp9P49962 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Srp9P49962 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Srp9P49962 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Srp9P49962 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp9P49962 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Srp9P49962 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp9P49962 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Srp9P49962 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.78■□□□□ 0.92
Srp9P49962 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp9P49962 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp9P49962 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.75■□□□□ 0.91
Srp9P49962 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Srp9P49962 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Srp9P49962 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Srp9P49962 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp9P49962 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp9P49962 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Srp9P49962 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Srp9P49962 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.7■□□□□ 0.9
Srp9P49962 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Srp9P49962 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Srp9P49962 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp9P49962 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms