Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rom1P32958 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rom1P32958 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.92■□□□□ 0.78
Rom1P32958 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rom1P32958 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rom1P32958 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rom1P32958 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rom1P32958 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rom1P32958 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rom1P32958 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rom1P32958 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rom1P32958 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.88■□□□□ 0.77
Rom1P32958 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rom1P32958 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rom1P32958 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.86■□□□□ 0.77
Rom1P32958 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rom1P32958 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rom1P32958 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rom1P32958 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rom1P32958 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rom1P32958 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rom1P32958 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rom1P32958 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rom1P32958 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rom1P32958 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rom1P32958 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rom1P32958 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rom1P32958 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rom1P32958 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rom1P32958 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rom1P32958 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rom1P32958 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rom1P32958 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.76■□□□□ 0.75
Rom1P32958 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rom1P32958 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rom1P32958 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rom1P32958 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rom1P32958 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.73■□□□□ 0.75
Rom1P32958 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rom1P32958 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rom1P32958 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rom1P32958 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rom1P32958 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rom1P32958 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rom1P32958 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rom1P32958 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rom1P32958 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rom1P32958 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rom1P32958 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rom1P32958 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rom1P32958 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rom1P32958 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rom1P32958 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.67■□□□□ 0.74
Rom1P32958 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rom1P32958 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rom1P32958 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rom1P32958 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rom1P32958 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rom1P32958 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rom1P32958 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rom1P32958 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rom1P32958 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.64■□□□□ 0.73
Rom1P32958 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.64■□□□□ 0.73
Rom1P32958 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rom1P32958 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rom1P32958 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rom1P32958 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rom1P32958 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.62■□□□□ 0.73
Rom1P32958 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rom1P32958 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Rom1P32958 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rom1P32958 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rom1P32958 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rom1P32958 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
Rom1P32958 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Rom1P32958 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rom1P32958 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rom1P32958 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.56■□□□□ 0.72
Rom1P32958 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
Rom1P32958 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rom1P32958 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Rom1P32958 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rom1P32958 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rom1P32958 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rom1P32958 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms