Protein–RNA interactions for Protein: P16390

Kcna3, Potassium voltage-gated channel subfamily A member 3, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna3P16390 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Kcna3P16390 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Kcna3P16390 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Kcna3P16390 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Kcna3P16390 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Kcna3P16390 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
Kcna3P16390 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Kcna3P16390 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Kcna3P16390 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Kcna3P16390 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Kcna3P16390 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Kcna3P16390 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.28■■■□□ 2.76
Kcna3P16390 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Kcna3P16390 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Kcna3P16390 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Kcna3P16390 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.25■■■□□ 2.75
Kcna3P16390 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Kcna3P16390 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
Kcna3P16390 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.24■■■□□ 2.75
Kcna3P16390 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Kcna3P16390 Gm11599-201ENSMUST00000118720 878 ntBASIC32.22■■■□□ 2.75
Kcna3P16390 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Kcna3P16390 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Kcna3P16390 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Kcna3P16390 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Kcna3P16390 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
Kcna3P16390 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.15■■■□□ 2.74
Kcna3P16390 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kcna3P16390 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kcna3P16390 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kcna3P16390 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Kcna3P16390 Mipep-204ENSMUST00000225043 1548 ntBASIC32.11■■■□□ 2.73
Kcna3P16390 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Kcna3P16390 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.1■■■□□ 2.73
Kcna3P16390 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
Kcna3P16390 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Kcna3P16390 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.06■■■□□ 2.72
Kcna3P16390 Nkain2-201ENSMUST00000092602 558 ntBASIC32.06■■■□□ 2.72
Kcna3P16390 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Kcna3P16390 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Kcna3P16390 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Kcna3P16390 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
Kcna3P16390 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Kcna3P16390 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Kcna3P16390 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Kcna3P16390 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Kcna3P16390 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Kcna3P16390 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32■■■□□ 2.71
Kcna3P16390 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Kcna3P16390 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC32■■■□□ 2.71
Kcna3P16390 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.99■■■□□ 2.71
Kcna3P16390 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.96■■■□□ 2.71
Kcna3P16390 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.96■■■□□ 2.71
Kcna3P16390 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
Kcna3P16390 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Kcna3P16390 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Kcna3P16390 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Kcna3P16390 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Kcna3P16390 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Kcna3P16390 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Kcna3P16390 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.85■■■□□ 2.69
Kcna3P16390 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Kcna3P16390 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Kcna3P16390 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Kcna3P16390 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC31.83■■■□□ 2.69
Kcna3P16390 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Kcna3P16390 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Kcna3P16390 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31.82■■■□□ 2.68
Kcna3P16390 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Kcna3P16390 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Kcna3P16390 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.79■■■□□ 2.68
Kcna3P16390 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
Kcna3P16390 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Kcna3P16390 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Kcna3P16390 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Kcna3P16390 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Kcna3P16390 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.75■■■□□ 2.67
Kcna3P16390 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Kcna3P16390 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Kcna3P16390 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Kcna3P16390 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Kcna3P16390 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Kcna3P16390 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Kcna3P16390 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Kcna3P16390 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Kcna3P16390 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Kcna3P16390 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Kcna3P16390 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.68■■■□□ 2.66
Kcna3P16390 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Kcna3P16390 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Kcna3P16390 Gm22567-201ENSMUST00000175542 342 ntBASIC31.67■■■□□ 2.66
Kcna3P16390 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Kcna3P16390 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Kcna3P16390 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Kcna3P16390 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Kcna3P16390 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.64■■■□□ 2.66
Kcna3P16390 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
Kcna3P16390 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Kcna3P16390 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Kcna3P16390 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms