Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smim1P0C8K7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim1P0C8K7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smim1P0C8K7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smim1P0C8K7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smim1P0C8K7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smim1P0C8K7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smim1P0C8K7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim1P0C8K7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim1P0C8K7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smim1P0C8K7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smim1P0C8K7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smim1P0C8K7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.5■□□□□ 0.39
Smim1P0C8K7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smim1P0C8K7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smim1P0C8K7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smim1P0C8K7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.48■□□□□ 0.39
Smim1P0C8K7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smim1P0C8K7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.48■□□□□ 0.39
Smim1P0C8K7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smim1P0C8K7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smim1P0C8K7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smim1P0C8K7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smim1P0C8K7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smim1P0C8K7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smim1P0C8K7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smim1P0C8K7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim1P0C8K7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim1P0C8K7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim1P0C8K7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim1P0C8K7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smim1P0C8K7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smim1P0C8K7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
Smim1P0C8K7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smim1P0C8K7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smim1P0C8K7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.37■□□□□ 0.37
Smim1P0C8K7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim1P0C8K7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smim1P0C8K7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim1P0C8K7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim1P0C8K7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim1P0C8K7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Smim1P0C8K7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smim1P0C8K7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim1P0C8K7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim1P0C8K7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim1P0C8K7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smim1P0C8K7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim1P0C8K7 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.33■□□□□ 0.37
Smim1P0C8K7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim1P0C8K7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim1P0C8K7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim1P0C8K7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim1P0C8K7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Smim1P0C8K7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smim1P0C8K7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim1P0C8K7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim1P0C8K7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim1P0C8K7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim1P0C8K7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smim1P0C8K7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim1P0C8K7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim1P0C8K7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smim1P0C8K7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim1P0C8K7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim1P0C8K7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smim1P0C8K7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Smim1P0C8K7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim1P0C8K7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim1P0C8K7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smim1P0C8K7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smim1P0C8K7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim1P0C8K7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim1P0C8K7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Smim1P0C8K7 Gm27325-201ENSMUST00000175467 74 ntBASIC17.23■□□□□ 0.35
Smim1P0C8K7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim1P0C8K7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim1P0C8K7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.2■□□□□ 0.34
Smim1P0C8K7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smim1P0C8K7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim1P0C8K7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.19■□□□□ 0.34
Smim1P0C8K7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim1P0C8K7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim1P0C8K7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim1P0C8K7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.16■□□□□ 0.34
Smim1P0C8K7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim1P0C8K7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim1P0C8K7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim1P0C8K7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim1P0C8K7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smim1P0C8K7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim1P0C8K7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim1P0C8K7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim1P0C8K7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms