Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp6P0C0A3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chmp6P0C0A3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Chmp6P0C0A3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Chmp6P0C0A3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Chmp6P0C0A3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Chmp6P0C0A3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.28■■□□□ 1.96
Chmp6P0C0A3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.28■■□□□ 1.96
Chmp6P0C0A3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.28■■□□□ 1.96
Chmp6P0C0A3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.28■■□□□ 1.96
Chmp6P0C0A3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.27■■□□□ 1.96
Chmp6P0C0A3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Chmp6P0C0A3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Chmp6P0C0A3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Chmp6P0C0A3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Chmp6P0C0A3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.25■■□□□ 1.95
Chmp6P0C0A3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.24■■□□□ 1.95
Chmp6P0C0A3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Chmp6P0C0A3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Chmp6P0C0A3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Chmp6P0C0A3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Chmp6P0C0A3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chmp6P0C0A3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Chmp6P0C0A3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Chmp6P0C0A3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Chmp6P0C0A3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Chmp6P0C0A3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Chmp6P0C0A3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Chmp6P0C0A3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp6P0C0A3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.12■■□□□ 1.93
Chmp6P0C0A3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp6P0C0A3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Chmp6P0C0A3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp6P0C0A3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Chmp6P0C0A3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp6P0C0A3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Chmp6P0C0A3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp6P0C0A3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp6P0C0A3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Chmp6P0C0A3 Zxda-201ENSMUST00000117281 2621 ntBASIC27.04■■□□□ 1.92
Chmp6P0C0A3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp6P0C0A3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp6P0C0A3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp6P0C0A3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Chmp6P0C0A3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
Chmp6P0C0A3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp6P0C0A3 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.01■■□□□ 1.91
Chmp6P0C0A3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Chmp6P0C0A3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Chmp6P0C0A3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Chmp6P0C0A3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp6P0C0A3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Chmp6P0C0A3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.96■■□□□ 1.91
Chmp6P0C0A3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Chmp6P0C0A3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Chmp6P0C0A3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Chmp6P0C0A3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Chmp6P0C0A3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chmp6P0C0A3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Chmp6P0C0A3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Chmp6P0C0A3 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.91■■□□□ 1.9
Chmp6P0C0A3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chmp6P0C0A3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Chmp6P0C0A3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Chmp6P0C0A3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Chmp6P0C0A3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.89■■□□□ 1.9
Chmp6P0C0A3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Chmp6P0C0A3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp6P0C0A3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp6P0C0A3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp6P0C0A3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Chmp6P0C0A3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chmp6P0C0A3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
Chmp6P0C0A3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.87■■□□□ 1.89
Chmp6P0C0A3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.86■■□□□ 1.89
Chmp6P0C0A3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chmp6P0C0A3 Gm45855-201ENSMUST00000212546 880 ntBASIC26.85■■□□□ 1.89
Chmp6P0C0A3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Chmp6P0C0A3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Chmp6P0C0A3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Chmp6P0C0A3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Chmp6P0C0A3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Chmp6P0C0A3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Chmp6P0C0A3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp6P0C0A3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chmp6P0C0A3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.8■■□□□ 1.88
Chmp6P0C0A3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Chmp6P0C0A3 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.79■■□□□ 1.88
Chmp6P0C0A3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.79■■□□□ 1.88
Chmp6P0C0A3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.79■■□□□ 1.88
Chmp6P0C0A3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Chmp6P0C0A3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Chmp6P0C0A3 Gm9397-201ENSMUST00000200125 605 ntBASIC26.76■■□□□ 1.87
Chmp6P0C0A3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chmp6P0C0A3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.75■■□□□ 1.87
Chmp6P0C0A3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chmp6P0C0A3 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.73■■□□□ 1.87
Chmp6P0C0A3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chmp6P0C0A3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Chmp6P0C0A3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms