Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.47■□□□□ 0.55
P06328 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P06328 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P06328 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P06328 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
P06328 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P06328 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P06328 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P06328 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.45■□□□□ 0.54
P06328 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
P06328 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
P06328 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
P06328 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P06328 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
P06328 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P06328 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P06328 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P06328 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
P06328 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P06328 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
P06328 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.39■□□□□ 0.53
P06328 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P06328 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
P06328 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P06328 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
P06328 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P06328 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
P06328 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P06328 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P06328 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P06328 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
P06328 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P06328 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P06328 Amer2-203ENSMUST00000225247 2662 ntBASIC18.35■□□□□ 0.53
P06328 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P06328 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.34■□□□□ 0.53
P06328 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.34■□□□□ 0.53
P06328 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
P06328 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P06328 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P06328 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P06328 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P06328 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06328 Gm26115-201ENSMUST00000175605 87 ntBASIC18.31■□□□□ 0.52
P06328 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
P06328 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P06328 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
P06328 Gm8109-201ENSMUST00000194076 746 ntBASIC18.3■□□□□ 0.52
P06328 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P06328 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P06328 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P06328 Peli2-204ENSMUST00000226513 1320 ntBASIC18.28■□□□□ 0.52
P06328 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P06328 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.27■□□□□ 0.52
P06328 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.27■□□□□ 0.52
P06328 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.26■□□□□ 0.51
P06328 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P06328 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06328 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P06328 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P06328 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06328 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06328 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06328 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P06328 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P06328 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
P06328 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P06328 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P06328 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06328 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06328 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
P06328 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06328 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P06328 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
P06328 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06328 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06328 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P06328 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
P06328 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P06328 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
P06328 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06328 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P06328 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P06328 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
P06328 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06328 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.16■□□□□ 0.5
P06328 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06328 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
P06328 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06328 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P06328 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06328 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P06328 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.15■□□□□ 0.5
P06328 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P06328 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06328 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.14■□□□□ 0.49
P06328 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P06328 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.11■□□□□ 0.49
P06328 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P06328 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms