Protein–RNA interactions for Protein: P01789

Ig heavy chain V region M603, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01789 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
P01789 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P01789 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P01789 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.65■□□□□ 0.74
P01789 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P01789 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
P01789 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
P01789 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
P01789 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P01789 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P01789 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
P01789 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
P01789 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.62■□□□□ 0.73
P01789 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
P01789 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
P01789 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.59■□□□□ 0.73
P01789 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
P01789 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
P01789 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.57■□□□□ 0.72
P01789 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P01789 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P01789 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P01789 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P01789 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.55■□□□□ 0.72
P01789 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
P01789 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.55■□□□□ 0.72
P01789 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.54■□□□□ 0.72
P01789 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
P01789 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P01789 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01789 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P01789 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P01789 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P01789 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P01789 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P01789 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P01789 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P01789 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P01789 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
P01789 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P01789 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
P01789 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01789 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P01789 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01789 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01789 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P01789 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.45■□□□□ 0.7
P01789 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01789 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.45■□□□□ 0.7
P01789 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.45■□□□□ 0.7
P01789 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01789 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P01789 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01789 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P01789 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
P01789 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
P01789 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
P01789 Gm25262-201ENSMUST00000174934 133 ntBASIC19.41■□□□□ 0.7
P01789 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.41■□□□□ 0.7
P01789 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01789 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P01789 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01789 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.38■□□□□ 0.69
P01789 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P01789 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01789 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01789 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01789 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01789 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01789 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01789 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.35■□□□□ 0.69
P01789 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
P01789 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01789 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01789 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P01789 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01789 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.34■□□□□ 0.69
P01789 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01789 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.33■□□□□ 0.69
P01789 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01789 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01789 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01789 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.33■□□□□ 0.68
P01789 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01789 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01789 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P01789 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01789 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01789 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01789 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01789 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01789 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.29■□□□□ 0.68
P01789 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01789 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
P01789 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P01789 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01789 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
P01789 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01789 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P01789 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms