Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cxcr3O88410 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cxcr3O88410 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cxcr3O88410 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.56■■□□□ 1.68
Cxcr3O88410 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cxcr3O88410 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.55■■□□□ 1.68
Cxcr3O88410 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cxcr3O88410 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Cxcr3O88410 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cxcr3O88410 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Cxcr3O88410 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Cxcr3O88410 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cxcr3O88410 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.51■■□□□ 1.67
Cxcr3O88410 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cxcr3O88410 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Cxcr3O88410 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cxcr3O88410 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Cxcr3O88410 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Cxcr3O88410 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cxcr3O88410 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cxcr3O88410 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cxcr3O88410 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Cxcr3O88410 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cxcr3O88410 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cxcr3O88410 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Cxcr3O88410 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.43■■□□□ 1.66
Cxcr3O88410 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cxcr3O88410 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cxcr3O88410 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.41■■□□□ 1.66
Cxcr3O88410 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cxcr3O88410 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Cxcr3O88410 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Cxcr3O88410 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
Cxcr3O88410 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cxcr3O88410 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cxcr3O88410 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cxcr3O88410 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cxcr3O88410 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Cxcr3O88410 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.32■■□□□ 1.64
Cxcr3O88410 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cxcr3O88410 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cxcr3O88410 Gm45855-201ENSMUST00000212546 880 ntBASIC25.3■■□□□ 1.64
Cxcr3O88410 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cxcr3O88410 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cxcr3O88410 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.29■■□□□ 1.64
Cxcr3O88410 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cxcr3O88410 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cxcr3O88410 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cxcr3O88410 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cxcr3O88410 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.27■■□□□ 1.64
Cxcr3O88410 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
Cxcr3O88410 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cxcr3O88410 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Cxcr3O88410 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cxcr3O88410 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cxcr3O88410 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cxcr3O88410 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Cxcr3O88410 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cxcr3O88410 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cxcr3O88410 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Cxcr3O88410 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.23■■□□□ 1.63
Cxcr3O88410 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cxcr3O88410 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
Cxcr3O88410 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cxcr3O88410 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cxcr3O88410 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Cxcr3O88410 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cxcr3O88410 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cxcr3O88410 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Cxcr3O88410 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.15■■□□□ 1.62
Cxcr3O88410 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cxcr3O88410 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cxcr3O88410 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.14■■□□□ 1.62
Cxcr3O88410 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cxcr3O88410 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.14■■□□□ 1.62
Cxcr3O88410 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.13■■□□□ 1.61
Cxcr3O88410 Gm9397-201ENSMUST00000200125 605 ntBASIC25.13■■□□□ 1.61
Cxcr3O88410 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Cxcr3O88410 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cxcr3O88410 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cxcr3O88410 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cxcr3O88410 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Cxcr3O88410 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cxcr3O88410 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cxcr3O88410 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Cxcr3O88410 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.08■■□□□ 1.61
Cxcr3O88410 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cxcr3O88410 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Cxcr3O88410 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cxcr3O88410 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.06■■□□□ 1.6
Cxcr3O88410 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cxcr3O88410 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cxcr3O88410 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cxcr3O88410 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.04■■□□□ 1.6
Cxcr3O88410 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cxcr3O88410 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.03■■□□□ 1.6
Cxcr3O88410 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cxcr3O88410 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Cxcr3O88410 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cxcr3O88410 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms